Gene VC0395_0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0467 
Symbol 
ID5134720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand- 
Start bp524405 
End bp525079 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content46% 
IMG OID640530790 
ProductDedA family protein 
Protein accessionYP_001215308 
Protein GI147671944 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000000000000020766 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATTCCG TACTCTCTAT TTTTAGTGCG CTTTGGCATC ACGATGCCTT CGCCCTACAA 
AACGTTAATT TACTCTTGCT GTATTTCTGC CTAGCGCTAC TGATTTTCTT GGAAAGTGGT 
TTCTTGCCTG CTGCGCCACT GCCTTGTGAT AGTGTCATCG TACTGAGTGG CTCGCTCGCT 
GCAACTGGTG TATTGCAACT GCACTTTGTG CTTATTACCC TATTCCTCGC GGGCTGGTTG 
GGTAGTCTGG TGGCTTTCTA CCAAGGCTCT CAGCTCAAAC ACTGGCGAAT AATTAACAAT 
TGGTTAGTGA AAGTTCCAGA TAAACAATTA ATGACGACCG ATAAACTGAT GCGTCGCTAT 
GGATTAATTG CTTTATTTTT TGGTCGCTTC TTCCCTGTAG TACGCTCTTT GCTCCCTATG 
GTGATGGGAT TACGTAATAG CGTTCAGCCG CTACGCTTTC TCTCAGCGTC AGCCATTAGT 
GCCCTATGCT GGGTTTTATT CTTGGTTGGC GCTGGCTTTG GTATTTCACT GTTACCCACT 
AAGCTCGAAC AATTTGCGAC CAAGCTACTG ATGATCGCAC CGATCTTCAC ACTGATTCTG 
GCCTTACTCA CATTTGCCGC CAGCGCCATA CTCAAAAAAC GCGAGCGTAA AGTGAAAGTC 
ACGGTAGAAG ATTGA
 
Protein sequence
MDSVLSIFSA LWHHDAFALQ NVNLLLLYFC LALLIFLESG FLPAAPLPCD SVIVLSGSLA 
ATGVLQLHFV LITLFLAGWL GSLVAFYQGS QLKHWRIINN WLVKVPDKQL MTTDKLMRRY 
GLIALFFGRF FPVVRSLLPM VMGLRNSVQP LRFLSASAIS ALCWVLFLVG AGFGISLLPT 
KLEQFATKLL MIAPIFTLIL ALLTFAASAI LKKRERKVKV TVED