| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0465 |
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| Symbol | |
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| ID | 5134301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 523055 |
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| End bp | 523747 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640530788 |
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| Product | DNA-binding response regulator |
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| Protein accession | YP_001215306 |
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| Protein GI | 147672097 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000000000321608 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGTG AAATTAAGAT CCTCATTATT GAAGACGAAG CGCCAATCCA ACGGTTTTTG
ACTGTGCTTA TTTCTGGTTA TGAGTATCAA GTGAAAGTGG CCAGCACGGC AGAGCAAGGG
CTGCATCTGG TGGCGAATTG GAATCCGCAT TTGATCCTGT TGGACTTAGG CTTGCCAGAT
CAAGACGGCA TCAGTTTGAC GAGAGAGCTG CGAGCATGGA CGCAAACCCC AATCATGGTG
ATTTCTGCCC GAGAAAAAGA AGCGGATAAA GTGCAAGCTC TGGATGCTGG CGCGAACGAC
TATTTGACTA AACCCTTTGG CAGTGAAGAG CTGATGGCTC GTATTCGGGT GGCGCTGCGT
TTAGCGCCGA GCACTGAAAG TGTAGAGCAA ACTCGTTTTG AATTGGGGGA TCTGGTGTTG
GATCTTGTGT TAAAGCAAGT CACCAAGGAT GGAGAGCCAG TAAAACTGAC CAAAACCGAA
TACAACATTT TGAAATTGCT AGCAAAAAAT ATGGGTAAGG TGCTCACACA CAAGCAGATC
TTAAAAGAAG TGTGGGGCGG CAATTATGTC GAACATCATC ACTATGTGCG CATCCATGTG
GCTCAGTTAC GCCATAAAGT GGAAGACAAT CCCGCGCAAC CGCGCTTCAT CTTGACAGAA
AATGGGGTTG GTTACCGTTT AGTGGATAAA TAG
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| Protein sequence | MNSEIKILII EDEAPIQRFL TVLISGYEYQ VKVASTAEQG LHLVANWNPH LILLDLGLPD
QDGISLTREL RAWTQTPIMV ISAREKEADK VQALDAGAND YLTKPFGSEE LMARIRVALR
LAPSTESVEQ TRFELGDLVL DLVLKQVTKD GEPVKLTKTE YNILKLLAKN MGKVLTHKQI
LKEVWGGNYV EHHHYVRIHV AQLRHKVEDN PAQPRFILTE NGVGYRLVDK
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