Gene VC0395_0462 details

Gene Information

• Locus tag: VC0395_0462
• Symbol: kup
• ID: 5134938
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009456
• Strand: +
• Start bp: 516270
• End bp: 518132
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640530785
• Product: potassium uptake protein, Kup system
• Protein accession: YP_001215303
• Protein GI: 147671467
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3158] K+ transporter
• TIGRFAM ID: [TIGR00794] potassium uptake protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.0831173
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACCTG CAAAACAAAC GACAGCCAGC TTGGCATTTC TGGCAATGGG TATCGTCTAT 
GGCGATATTG GAACCAGTCC TCTTTACGCT TTTAAAGAAG TGTTCTTCAG TCACCATCCA 
CTCGCGATTA ACCCTGACAA TGTGTTGGGG ATTTTATCTT TGGTGTTTTG GGCATTTGTC 
CTGATCGTTT CCATTAAATA TCTTTTGCTG GTGACACGCG CCGATCAAAA TGGTGAAGGC 
GGTATTCTGA CTTTATCCGC CATTGCTCAA CAAAATGCCC CCAAACCTTG GCGGCGGATT 
GCCATGTTAC TTGGGATTTT GGCGACGGGC TTTTTCTTTG GTGAAGCGGT GATAACGCCC 
GCCATGTCAG TACTTTCTGC GGTAGAAGGG ATTGCGGTGG CGCAACCTGA CTTAGCTCCT 
TATGTACTGC CCATTGCCAT GATGATTATT GTGGCGCTGT TTGCGGTGCA AGCGATGGGA 
ACTGAGCGTA TCGGGCGCTT TTTCGCGCCA GTGATGTTGC TGTGGTTTTT AGTGCTGGCT 
TTACTCGGTG CCCATGCAAT TTGGCACGCG CCCCAAGTAT TACGTGCACT CAACCCAGCG 
TATGCGGTGC ATTTTGTCTT GCTTCATGGA CAGCACACCC TGTTTATTTT GGGCTTAGTC 
GTGCTTTCGG TGACTGGGGT TGAAGCATTG TACGCCGATA TGGGGCACTT TGGGATTAAG 
CCGATCCGCA TTGCGTGGTT TGCACTGGTG ATGCCCAGTT TGCTGCTCAA CTATTTTGGG 
CAAGGGGCGT ATCTGCTTAC CCTGTCTGCG CCCACAGGTT CTACTTTCTT TAGCCTTGCG 
CCTAAAGCTT GGTTGTGGCC TTTGATCTTG CTGGCGACGT TTGCCACTGT TATTGCTTCG 
CAAGCGGTCA TCTCTGGGAT CTTTTCGTTA GCGAGACAGG CCATCAACTA TGGCTATTTG 
CCGCCGATGA AAATTGCGCA TACTTCAGAG CATTCACAAG GGCAGATTTA TGTGCCCGCG 
GCGAACATGT TGTTGTTTGT GGCCGTGATT TTTGTGATGT TGCGTTTTCG CTCATCCGCC 
AACTTAGCGG CTGCCTACGG TATTGCGGTC ACAGCGATCA TGATGATCTC TTCGCTACTG 
TTGGTTTTGG TTGCGCGTTA TCAATGGCAG TGGAGATGGC CGCGAGTCGT CACGATTGGG 
ATCGCGTTTA TTGGCATGGA TACTTTGTTG TTAGCGTCGA CCTCAACCAA ATTGATGGAG 
GGTGGTTGGC TGCCTCTGCT TTTAGGATGC GTGGTGTTTA TCGTCATGTA TATCTGGCAG 
CAGCAGCGCC AACGCTTGCT GGAAATTGCC GGTAACGAGC TCTCGGTTTC GGCGATGATT 
CAGTCATTGG AGGAAGAGTC TTTCCAACGT GCCGCAGGAA CCGCCGTTTA TCTGTCTCGC 
TCGTTGAATC ATGTGCCGCG CTCGCTGCTG CACAATATCA AATACAACAA GACCTTACAT 
GAAAGAAATG TATTGATGAC CTTTCAATAT GAAGCGGTAC CAAGGGTTCA CCCATGTCGC 
AGAGCTGAGA TAGAGCAGGT CTCGGCCAGT TTTTGGCAAG TGGTGATCCA TATCGGTTAT 
CAAGAGGAGC CAGATATGGC GCAAGTGATG CATTGCTGCG GTCTAAAAGG CTTGTATTTG 
CATCCCAATG AAACGCTCTT TTTGCTCTCT TCAGAGCGAT TGAAAGTACA AAAACTGGGG 
ATGTGGCATG ACCTGAAAGT CTGGTTCTTT ATTCAGATGA GCAAACATGC GCTGAGAACG 
TCGGAAAGAT TGAATATTCC TCCCGATCGC CTAATTGAGA TGGGTGTGTA CCGAGAGATG 
TAA 

 

Protein sequence

MKPAKQTTAS LAFLAMGIVY GDIGTSPLYA FKEVFFSHHP LAINPDNVLG ILSLVFWAFV 
LIVSIKYLLL VTRADQNGEG GILTLSAIAQ QNAPKPWRRI AMLLGILATG FFFGEAVITP 
AMSVLSAVEG IAVAQPDLAP YVLPIAMMII VALFAVQAMG TERIGRFFAP VMLLWFLVLA 
LLGAHAIWHA PQVLRALNPA YAVHFVLLHG QHTLFILGLV VLSVTGVEAL YADMGHFGIK 
PIRIAWFALV MPSLLLNYFG QGAYLLTLSA PTGSTFFSLA PKAWLWPLIL LATFATVIAS 
QAVISGIFSL ARQAINYGYL PPMKIAHTSE HSQGQIYVPA ANMLLFVAVI FVMLRFRSSA 
NLAAAYGIAV TAIMMISSLL LVLVARYQWQ WRWPRVVTIG IAFIGMDTLL LASTSTKLME 
GGWLPLLLGC VVFIVMYIWQ QQRQRLLEIA GNELSVSAMI QSLEEESFQR AAGTAVYLSR 
SLNHVPRSLL HNIKYNKTLH ERNVLMTFQY EAVPRVHPCR RAEIEQVSAS FWQVVIHIGY 
QEEPDMAQVM HCCGLKGLYL HPNETLFLLS SERLKVQKLG MWHDLKVWFF IQMSKHALRT 
SERLNIPPDR LIEMGVYREM