| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0461 |
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| Symbol | rbgA |
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| ID | 5134865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 515004 |
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| End bp | 515948 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530784 |
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| Product | ribosomal biogenesis GTPase |
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| Protein accession | YP_001215302 |
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| Protein GI | 147672345 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1161] Predicted GTPases |
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| TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.178573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAACA ACTCAATCCA ATGGTTTCCG GGGCACATGC ACAAAGCACG CAAGGAAATC
GAAGAAGCGA TTCCGCAAGT CGATGTGATT ATCGAAGTGC TTGATGCGCG TATTCCTTTC
AGTAGCGAAA ACCCGCTGAT TTCGCATATC CGTGGTGAAA AACCTTGTGT GAAGGTACTG
AATAAGCGCG ATCTTGCGGA TCCTGAGTTA ACCGAGCTGT GGATTGCCCA TCTTGAGCAA
GAGAAAGGGG TGAAAGCGAT GGCGATCACC ACATCCAATC CGCAGGAAGT ACACAAGATC
CTCGAACTGT GCCGCAAGCT CGCTCCACAG CGTGAAGAGA TCGGCAAAAA CATTCGCACC
ATGATCATGG GCATTCCGAA CGTAGGGAAA TCAACCATTA TCAATACCTT AGCGGGCCGC
GCAATTGCTC AAACCGGAAA CCAACCCGCA GTGACTCGTC GTCAACAGCG CATCAATCTG
CAAAATGGGA TTGTGCTCTC TGATACTCCG GGAATTTTGT GGCCAAAAGT GGAAAACCCT
CATAGCGGTT TTCGTTTGGC GGCCACTGGC GCGGTGAAAG ATACCGCGAT GGAATACGAT
GAAGTGGCGT TTTACACCGT CGAGTATCTG GCTAAGCACT ACCCAGAAAG ATTGAAAGAG
CGTTACCAAA TCGATGAACT TCCAGAAACC GATGTTGAAT TGATGGAAGA GATCGGTCGT
AAGCGTGGTG CGCTACGTGC AGGTGCGCGA GTGGATCTGC ATAAAGCCTC TGAAATCCTA
CTGCATGAGC TGCGTCAAGG TGTACTTGGA CAAATCACCT TGGAGCGCCC AGAAATGATC
ACCGAAGAGT TACAACAAGT TGAAATTGAT GAAGCGCTGA AAGCCGAAGA GAAAGCCAAA
CGTAAAGAAG AGCGCCGTAA GCGTTATCTG CGTAACAAAC GTTAA
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| Protein sequence | MVNNSIQWFP GHMHKARKEI EEAIPQVDVI IEVLDARIPF SSENPLISHI RGEKPCVKVL
NKRDLADPEL TELWIAHLEQ EKGVKAMAIT TSNPQEVHKI LELCRKLAPQ REEIGKNIRT
MIMGIPNVGK STIINTLAGR AIAQTGNQPA VTRRQQRINL QNGIVLSDTP GILWPKVENP
HSGFRLAATG AVKDTAMEYD EVAFYTVEYL AKHYPERLKE RYQIDELPET DVELMEEIGR
KRGALRAGAR VDLHKASEIL LHELRQGVLG QITLERPEMI TEELQQVEID EALKAEEKAK
RKEERRKRYL RNKR
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