| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0453 |
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| Symbol | |
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| ID | 5134789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 503136 |
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| End bp | 504275 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530776 |
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| Product | putative exonuclease SbcD |
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| Protein accession | YP_001215294 |
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| Protein GI | 147671856 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTC TACATACTTC GGATTGGCAT CTTGGTCGCC AATTTCATCA AGTCTCATTA
TTAGATGATC AAAGCGCCGT TCTCGCACAA CTGATCGGCT TTCTGCGCGA CAATCCGGTG
GATGCCGTGA TTGTCGCCGG TGATATTTAT GATCGGTCGA TTCCACCCAC GGCGGCGATT
GATTTATTGG ATGAAGTGGT CAGCGTGATC TGTGGCGAGT TGAATACCCC TTTATTGATG
ATCCCGGGCA ATCACGATGG TGCGAAGCGT TTAGGATTTG CCGCGAAGCA GATGAAAAAT
TCGGGCTTAC ATATCTTTGC TGATTTTGCA CAGATGATGC AGCCACTTGT GCTGCATTCA
CCACAAGCGG GCGAGGTCGC CTTCTGGGGA ATGCCTTATC ACGACCCTGA GGTAGTGCGC
CATTACTATC AGAATGACAT CACCACGCAT GACGCTGCAC ACCAATTTTT GTGCGAGAGT
ATTCTTGCTC AGTGCAATCC GTCACAACGT CACGTATTAA TCAGCCACTG TTTTGTCGAT
GGCGCGATGG AGTCGGAATC TGAGCGGCCA TTATCGATTG GTGGATCAGA TCGTGTTGAC
CATCGCCATT TTTTGCCTTT TGACTACGTC GCGCTTGGGC ATTTACACCA GCCGCAAATG
AAAGGCGCGG AACACATTCG CTACTCTGGC TCATTGATGA AATACAGCTT CGGTGAGCAG
CACCAAAACA AAGGCGCTAC CTTGGTAGAG CTGGGTCAGC AAGGTTTTAT CAGCGCAACG
CATATTCCTC TCACCGCGCC TCATCAAATG CGCATTATCG AGGGAGAGTT GGAGGCGATT
CTTGCGGCGG GAGCCACCGA CCCGCAGGCA GACGATTACC TGCTAGTGCG TCTTCTGGAT
AAGCATGCCA TTCTCGACCC GATGGAAAAG CTGCGTCAGG TTTATCCCAA TGTGCTGCAT
CTTGAAAAGC CGGGCATGTT GATTGGTGTG GATCAAGAGA TGGGCAAGGC ACGATTGGCG
CGAGGGGAAT TGGATATGTT TCGTGATTTT TTCCTTGAGG CGAAACGTGA ACCTCTGAGT
GAGCAGCAAG AGAAAGTGGT GATCGAGGTG ATTGCGCGCC TGAAAGCGGA GGGCATGTAA
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| Protein sequence | MKFLHTSDWH LGRQFHQVSL LDDQSAVLAQ LIGFLRDNPV DAVIVAGDIY DRSIPPTAAI
DLLDEVVSVI CGELNTPLLM IPGNHDGAKR LGFAAKQMKN SGLHIFADFA QMMQPLVLHS
PQAGEVAFWG MPYHDPEVVR HYYQNDITTH DAAHQFLCES ILAQCNPSQR HVLISHCFVD
GAMESESERP LSIGGSDRVD HRHFLPFDYV ALGHLHQPQM KGAEHIRYSG SLMKYSFGEQ
HQNKGATLVE LGQQGFISAT HIPLTAPHQM RIIEGELEAI LAAGATDPQA DDYLLVRLLD
KHAILDPMEK LRQVYPNVLH LEKPGMLIGV DQEMGKARLA RGELDMFRDF FLEAKREPLS
EQQEKVVIEV IARLKAEGM
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