| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0445 |
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| Symbol | nrdD |
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| ID | 5134089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 493009 |
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| End bp | 495129 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640530768 |
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| Product | anaerobic ribonucleoside triphosphate reductase |
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| Protein accession | YP_001215286 |
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| Protein GI | 147671741 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACCTA TCGTAATCAA ACGTGATGGC TCAAAAGCGC CATTCAACAG GGATCGTATC
CAAGCTGCTG TAGAAAGTGC TGCGGAACAT GCCGATCAGG AAATCGCTAT CTACGCACTC
AATGTGGCAT TAGCCGTTGA ACTCAAGCTG CGTGATTACG ATGAGGTACA CATCACCGAG
ATTCAAACCT TAGTAGAGAA CGAGCTAATG CAAGGCCCGT ACAAAGCATT AGCTCGTTCA
TACATTGAAT ATCGCCATGA CCGCGATGTC GCGCGTGAGA AGCAGAGCAA GCTGACCAAA
GAGATCGAAG GTCTGATCCA AGAAAGCAAT GCGGATCTGC TCAATGAAAA CGCCAATAAA
GATGGCAAAG TGATCCCGAC TCAGCGCGAT TTGTTGGCGG GTATTGTCGC CAAGCATTAT
GCCAAAACGC GAATTTTACC ACGTGATGTG GTGCAAGCTC ATGAGTCGGG CGATATTCAT
TATCATGATC TGGATTACGC GCCTTTCTTC CCGATGTTTA ACTGCATGTT GATTGACTTA
AAAGGCATGC TGACTCATGG GTTTAAAATG GGTAATGCTG AAATTGACAC GCCTAAGTCA
ATTTCAACCG CAACGGCAGT TACCGCGCAA ATTATTGCTC AAGTCGCGAG CCATATTTAT
GGTGGCACTA CCATCAACCG GATTGATGAA GTACTGGCTC CTTATGTGAC GGCAAGCTAC
GAAAAGCATT TAGAGATTGC CCGCGAATGG GATATTCACA ACCCTGAAGC GTTTGCTAAG
GCGCGCACGG AAAAAGAGTG CTATGACGCT TTCCAATCGT TGGAGTATGA AGTCAACACG
CTGCATACCG CGAATGGGCA AACACCGTTT GTGACTTTTG GTTTTGGTCT GGGTACAAGC
TGGGAATCGC GCTTGATCCA GCAATCGATC CTGAAAAATC GCATCGCAGG TTTGGGTAAA
AACCGTAAAA CGGCGGTATT CCCGAAACTG GTGTTTGCGA TTAAAGATGG GCTCAACCAC
AAAGCAGAAG ATCCTAATTA CGACATTAAG CAGATCGCGT TAGAGTGCGC TTCTAAACGC
ATGTACCCAG ACATTCTCAA CTACGACAAA GTGGTTGAAG TGACGGGTTC ATTCAAAACC
CCGATGGGAT GTCGCTCTTT CCTAAATCCT TATGAGGAAA ATGGGGAGTT GATCCATGAA
GGGCGTAATA ATCTTGGCGT TGTCAGCTTG AACCTGCCAC GCATTGCCTT GCAGGCGAAA
GGCGATATAA ACAAATTCTA TGCTCTGTTG GATGACAAAC TGAAAATTGC TCGCCGCGCA
TTAGATACTC GGATTAACCG TTTAGAAAAT GTGAAAGCAC GTGTTGCACC AATCCTATAT
ATGGAAGGTG CGTGTGGTGT GCGTTTGAAA GCAAATGATT CGATTGCGGA TATTTTCAAA
CATGGCCGTG CTTCTATTTC ATTGGGTTAT ATCGGTGTAC ATGAAACCAT CATGGCGCTG
TTTGGTCAGC AAAAGCATGT TTATGATGAT GTGCAACTGC GCGAAGAAGC CGTGAAAATC
ATTCAACATC TGCGCAACGC GGTTGAACAG TGGAAAAAAG AGACTGGTTA CGCGTTCAGC
CTGTATGGCA CACCGAGTGA AAACCTGTGC AGCCGATTCT GCCGAATTGA TGCCAAGCAA
TTTGGCGTGG TGGAAGGGGT GACGGATAAA GGTTACTACA CCAACAGCTT CCATTTGGAT
GTTCAGAAGA AGGTGAATCC GTACGATAAG ATCGATTTTG AAATGCCATA TCCGGAAATT
TCAAGCGGTG GATTCATCTG CTACGGCGAA TTCCCGAACA TGCAACGTAA CGTAGAAGCA
CTCGAAAACG TATGGGATTA CAGTTATCAC CGCGTGCCGT ATTACGGGAC CAATACGCCA
ATCGATGAAT GTTATGAGTG TGGTTTCACT GGCGAATTTG ACTGTACCAG TAAAGGGTTT
GTTTGCCCGC GATGTGGCAA TCATGAGCCG ACCAAAGTCT CAGTGACGCG TCGAGTATGC
GGTTATTTGG GCAGCCCAGA TGCACGTCCA TTTAACGTCG GTAAGCAAGA AGAAGTCAAA
CGTCGGGTAA AACACCTGTA A
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| Protein sequence | MKPIVIKRDG SKAPFNRDRI QAAVESAAEH ADQEIAIYAL NVALAVELKL RDYDEVHITE
IQTLVENELM QGPYKALARS YIEYRHDRDV AREKQSKLTK EIEGLIQESN ADLLNENANK
DGKVIPTQRD LLAGIVAKHY AKTRILPRDV VQAHESGDIH YHDLDYAPFF PMFNCMLIDL
KGMLTHGFKM GNAEIDTPKS ISTATAVTAQ IIAQVASHIY GGTTINRIDE VLAPYVTASY
EKHLEIAREW DIHNPEAFAK ARTEKECYDA FQSLEYEVNT LHTANGQTPF VTFGFGLGTS
WESRLIQQSI LKNRIAGLGK NRKTAVFPKL VFAIKDGLNH KAEDPNYDIK QIALECASKR
MYPDILNYDK VVEVTGSFKT PMGCRSFLNP YEENGELIHE GRNNLGVVSL NLPRIALQAK
GDINKFYALL DDKLKIARRA LDTRINRLEN VKARVAPILY MEGACGVRLK ANDSIADIFK
HGRASISLGY IGVHETIMAL FGQQKHVYDD VQLREEAVKI IQHLRNAVEQ WKKETGYAFS
LYGTPSENLC SRFCRIDAKQ FGVVEGVTDK GYYTNSFHLD VQKKVNPYDK IDFEMPYPEI
SSGGFICYGE FPNMQRNVEA LENVWDYSYH RVPYYGTNTP IDECYECGFT GEFDCTSKGF
VCPRCGNHEP TKVSVTRRVC GYLGSPDARP FNVGKQEEVK RRVKHL
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