| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0432 |
|---|
| Symbol | |
|---|
| ID | 5135013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009456 |
|---|
| Strand | + |
|---|
| Start bp | 479856 |
|---|
| End bp | 481817 |
|---|
| Gene Length | 1962 bp |
|---|
| Protein Length | 653 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640530755 |
|---|
| Product | phosphoglycerol transferase |
|---|
| Protein accession | YP_001215273 |
|---|
| Protein GI | 147672086 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.504655 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAATAAAC TCAAATTATT CTTTGGGCCT CTTTATCCTA TCGTTTGCGC TGTATTCGCC
TTATTAGTCA TTTTTGCGCT ATCACGTTTA GGTCTTGCTA TGTGGCATTT TGATCGCGTA
ACGAATGCTG ACGGCTGGAT ACGCATTTTC ACTAGTGGCT TAAGGGTGGA CTTTGCGTCA
ATCTGCTATT TGTTTATTTT ACCTGCACTT TTGACTAGCT TAATTTCTGG TGAGCATTGG
TTAGGCCGCA TTTGGAATTG GGTGTTGCGT CTTTGGATCA CGGCTGGGTT ATGGTTCGTT
GTGTACATGG AAGTGGCTAC TCCTCCTTTT ATCATTGAGT ACGATCTGCG CCCTAATCGC
TTATTTGTGG AATACCTTAT CTATCCGAAA GAAGTCTTCG GTATGCTGTG GTCGGGTTAC
AAATTGGAGC TATTTATCGG CCTAGTCGTG AGTGTATTAA CGGTTGTACT CGGCTGGCGA
TGGAGTAAAA CACTCGTTTC CAACTTGCAT TACCCCAAGT GGTATTGGCG TCCAGTGATT
GCTGTGCTTG TGGTCACTGT TGGGGTATTA GGAGCTCGTT CTTCTTTAGG GCATCGCCCA
ATGAACCCTG CAATGGTCTC TTTCTCTAGC GATCCTTTGA TGAACGATCT TGCGCTCAAC
TCCGCGTATT CAGTGATTTT CGCAGCCAAG CAAATGGGCT CAGAGGCCAA CGCATTTGAA
TTTTATCCGA AAATGGATAA ACAACTCGTG ATCGATCAAG TTCGTGCTTC GATGACTGTA
GCCCCGGAAG ATTTTATTAG TGATGACAAA CCGTCTTTGG CCAATCATGT TGCGACTTAC
CAAGGTGCAC CTAAAAACAT CGTCATTTTG TTGATGGAAA GCCACGGGGC GCGTTATGTA
AAAAGCCTTG GGGGAATCGA TGTTTCTCCA AACATGGACA AACTGATTAA CGAAGGCTGG
GCATTCACTC GCATGTACGC TACGGGTACT CGCTCTGTAC GTGGTATTGA AGCAGTAACC
ACAGGATTTT CTCCAACGCC TGCTCGCTCT GTGGTGAAGT TAGGTAAAAG CCAGAATAAC
TTCTTCTCAA TTGCAGGCTT GCTGAAAACT CAGCAGTACC ACACGCAATT TATTTATGGT
GGCGAGAGCC ATTTTGACAA TATGAAGAGC TTCTTCCTCG GCAACGGTTT TGTGGATATG
CAAGATCTAC CTACCTTCTC AAATCCTAAG TTTGTCGGTT CGTGGGGAGC GTCGGATGAA
GATCTGTTCA ATAAAGCTGA TGAGCAGTTC ACGCAAATGG TACAAGAAGG TAAACCCTTC
TTTAGTTTGG TATTTACCTC GTCTAACCAT AGCCCGTTTG AATACCCTGA TGGCGTGATT
ACACCATACA ATGAACCGAA ACAGACGGTA GAAAATGCAG TGAAATACGC TGACTACGCG
TTGGGGCAAT TTGTTGAAAA GGCGAAAAAA TCTCCTTATT GGGATAACAC CGTGTTTGTT
GTTGTCGCAG ACCATGACGC GCGTACACAA GGTACCAATC CAATCCCTGT GGAATACTTT
CATATTCCAG CGGTTATTTT TGGTGGTGGC ATTGAAGCGC GTAAAGATGA CCGCTTACTC
AGCCAGTTGG ATTTAGCTCC GACGCTACTC TCCTTAGCCG GTATTAGTAG TCAAAACCCA
ATGATTGGCT TTGATTTAAC CCAAGACGTT CCGGTTGAAA AGCAACGCGC TATGATGCAA
CGTGACAAAA ACTTTGGTTG GTTAACACCG GATAACCAAG TGGTTGTATT GCAGCCAGGA
CAAGATATCA CGACCTATCA ATATGACTCA GTGACACATA AGATGACACC ACTTCAGCTT
GACGAATCGA TCGTGACTCG CGCGCATGCT AATGCGATGT GGGGGAGTCT GGCATTCAAA
GAGAATTTCT ACACCGCACA AAAAAGTTAT GAATTGGAAT AA
|
|---|
| Protein sequence | MNKLKLFFGP LYPIVCAVFA LLVIFALSRL GLAMWHFDRV TNADGWIRIF TSGLRVDFAS
ICYLFILPAL LTSLISGEHW LGRIWNWVLR LWITAGLWFV VYMEVATPPF IIEYDLRPNR
LFVEYLIYPK EVFGMLWSGY KLELFIGLVV SVLTVVLGWR WSKTLVSNLH YPKWYWRPVI
AVLVVTVGVL GARSSLGHRP MNPAMVSFSS DPLMNDLALN SAYSVIFAAK QMGSEANAFE
FYPKMDKQLV IDQVRASMTV APEDFISDDK PSLANHVATY QGAPKNIVIL LMESHGARYV
KSLGGIDVSP NMDKLINEGW AFTRMYATGT RSVRGIEAVT TGFSPTPARS VVKLGKSQNN
FFSIAGLLKT QQYHTQFIYG GESHFDNMKS FFLGNGFVDM QDLPTFSNPK FVGSWGASDE
DLFNKADEQF TQMVQEGKPF FSLVFTSSNH SPFEYPDGVI TPYNEPKQTV ENAVKYADYA
LGQFVEKAKK SPYWDNTVFV VVADHDARTQ GTNPIPVEYF HIPAVIFGGG IEARKDDRLL
SQLDLAPTLL SLAGISSQNP MIGFDLTQDV PVEKQRAMMQ RDKNFGWLTP DNQVVVLQPG
QDITTYQYDS VTHKMTPLQL DESIVTRAHA NAMWGSLAFK ENFYTAQKSY ELE
|
|---|
| |