| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0431 |
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| Symbol | |
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| ID | 5134149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 478773 |
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| End bp | 479765 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640530754 |
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| Product | putative serine protease |
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| Protein accession | YP_001215272 |
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| Protein GI | 147672336 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5640] Secreted trypsin-like serine protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.410989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCAAAT GGCTATGGCT CCTGTTACTG CTGACAACGC GAGTTTCTGC GGTTGAGATT
TCGCCGTACA TCGTCAATGG TACCAATGCG AATGTCGCAA ACTACCCTTC GTTTGCCAGC
TTGGCGATTT ATATCTCTCC TTATCAATAC AGCTCAGGAA CCTACTGTGG TGCGACGGTT
CTGAATTCAC GTTATATCTT GACGGCAGCA CATTGTATTT ATGGCAATAG CTATACCATG
TTGTATACCG TTGTGGTTCC TCAGTTGGAA GATGAAAGCC AGTTCCCCAA TGGCAATGTT
CAACTTGCTC GTGCCGCGGA ATTTTATTAT CCCGATAACT ATGTCGATTC TTCGGCAGTG
TATTGGCCAA ATGATATTGC GATCATCAAG TTAGAAAGCG ACCTTAACGT GAGTAATTTC
GTTGGGGTAC TCAATAGCTC CATCAATAAC AGCTATGACG TGAATGGGAC CTATAAAGCG
ATTGGTCACG GCTATGTGAA TGGTAATGTC GCCGGAGGAA CCCGTTTATT AGAGACCACC
TTAACCTTTG TTCCGTTTGC GACCTGCTCG GCTTATTACG GTGCTAATTT AGGCCCTGGG
CATGTCTGCT TTACAGGGCC ACAAATCGGT TCGTATCGCA ACTCCACCTG CTCTGGGGAT
TCCGGAGGTC CTGTCTATTG GGATAGTGGC TCTGGATATG TGCAAATTGG GATCACCAGT
TTTGGACCAT CAACCTGTGG CAATCCAGCG CTGCCCGTTA CCTCGGTATT CACGGAAGTA
TCCGATTACT ACAGTTGGAT ATTACGTGTC ATGAATGGAT TAGAGACGCC CAAATATTAC
GTTACAGAAA GTAATGGAGT ACGGCAGTTG GTTGCAGGAG GGACTACAAC GGTTAGCGTG
AGTGAGAGCT CATCTGGAGG AGGTGTCTCT TTGCTTATTG CTTTCTTTTT AGGCATGTTG
ATGATTATTC GACGTAACAA TCTGAAAATT TGA
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| Protein sequence | MRKWLWLLLL LTTRVSAVEI SPYIVNGTNA NVANYPSFAS LAIYISPYQY SSGTYCGATV
LNSRYILTAA HCIYGNSYTM LYTVVVPQLE DESQFPNGNV QLARAAEFYY PDNYVDSSAV
YWPNDIAIIK LESDLNVSNF VGVLNSSINN SYDVNGTYKA IGHGYVNGNV AGGTRLLETT
LTFVPFATCS AYYGANLGPG HVCFTGPQIG SYRNSTCSGD SGGPVYWDSG SGYVQIGITS
FGPSTCGNPA LPVTSVFTEV SDYYSWILRV MNGLETPKYY VTESNGVRQL VAGGTTTVSV
SESSSGGGVS LLIAFFLGML MIIRRNNLKI
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