| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0406 |
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| Symbol | acs-2 |
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| ID | 5134539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 449358 |
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| End bp | 451337 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530729 |
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| Product | acetoacetyl-CoA synthetase |
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| Protein accession | YP_001215247 |
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| Protein GI | 147671723 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000302212 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCGA CTACACCATT GTGGACGCCA AGCCACGAGC GCATTTCCGC TTCTAACCTG
CAACAGTTCA TCGCACATGT GAACATGCAA GGTGAAGCGA TCGACAGTTA TTCTTCGTTA
CATCAGTGGT CTGTTGCTGA AACACGACAA TTCTGGCTTG AGGTGTGGCA ATTTTGCGAT
GTGATCGGCT ATCGCGGAAA CTGCATTATT GGTGAAGGAC TACCTCGTTT TGGTAAAACC
ATGGTTCCCG CTCGTGATTC GATCTGGTTT CCACAAGCTC AGCTCAACTA CGCAGAAAAC
CTACTCTCAT ACGCATTCCA AAATCCCGAT GGGATCGCCC TCTGGTTTAA AAATGAAAAT
GGCCATACCA AGAAATTCAG TTGGCAGCAG TTGTGTGATC ATGTTTCCGT CGTTCAACAG
TGGTTGGCAC AAAATGGCGT TGGAGAGGGT GATGTCGTGG CTGGCTATCT TCCCCACTTA
CCCGAAACCG TGATTGCCAT GTTAGCCGCC ACCAGTTTAG GGGCAATCTG GACTTCGACG
TCACCGGATT TTGGCGTGGA AAGTGTGATT GAACGCTTTG GTCAAGTTCA ACCGAAAATT
CTGTTTTGTT GTAATGGCTA CACGTTTAAC GGTAAATCGT TTCCCATGCA AGAGCGTAAT
GCTCAGATAG CGAGCGCCCT GCCAAGCCTA GTCAACACCT GTCAAATCGA ATATCTGCAA
GATCGCAACT TCACACCGGA TTTCAATGAT AGCTTTTCTG ACTGGCAATC GATTTTCGCC
AGTTATCAAC CGCGAGGAGT CGAATACCGC CGGATTGGTT TTAACGATCC GCTGTTTGTT
CTGTATTCCT CTGGAACAAC GGGCAAACCG AAATGTATCA CGCACTCCGT TGGCGGTACG
CTACTCAATC ATTTGAAAGA GCATCAGTTA CACTGTGATA TCCAGCCACA AGATCGCGTG
TTCTATTACA CCACAACAGG TTGGATGATG TGGAACTGGC ATGTCTCTGC ACTCGCCAGT
GGCGCAACCT TAGTGATTTA TGATGGGCAT CCACTCTACC CACAAGCGGG AGCGTTATGG
GCTCTGGTTG ACGAAGCCAA AGTCAGTTTG TTTGGCACCT CTGCCAAGTA CCTAGAAACA
CTGCAAAAAA ATCAGTTTTC TCCATGCGAT TTTTACTCAT TAAGCCACTT AAAGACCCTG
TGTTCGACCG GTTCGGTGCT CTATCCTGAG CAATTTGACT ATGTGTATGA GCATGTCAAA
TCCGATCTGC ATCTGGCTTC TATTTCTGGT GGCACGGATA TTTGCGGCTG CTTTGTGCTT
GGTAACCCTA TTTCTCCGGT TTATCAGGGC GAATGCCAAA GTGCGGGCTT AGGTTTGGAT
GTCGTGGCTT ACAATCAGCA TGGAGAGGCC ATCGTCGCTG AGCGTGGAGA GCTGGTATGC
CGAAACAGTT TCCCCAATCA ACCGATTGGA TTTTGGCATG ATGATGGCAG CCGTTATCAC
CAAGCTTATT GGGATAAATA CCCGGGAGTT TGGCATCATG GCGATGAAAT CGAAATCACC
GACAAGGGAG GTGTATTATT CTTCGGTCGC AGCGACACCG TTCTGAACCC GGGTGGAGTT
CGGATTGGCA CGGCTGAAAT CTATCAGCAA GTCAATGCAT TACCTGAGAT CCACGATTCG
ATTGCCATTG GCCGCCATAT TGACCGCGAT GAACAGGTGA TTCTATTCGT TCAACTCGCG
CAAAACGTCC CCTTTAATGA CGAGCTGCAG CAGAAAATCC GCAGCTTACT GCGCGAACGC
TGCTCTCCAC GCCATGTTCC TGCTCACATT TATGCCATCA GCGAAATCCC GCGCACGAAA
TCGGGCAAGC TGGTCGAACT GGCCGTCAAA CAAGTGTGTC ATGGTGACGA AGTGAAAAAC
CTAGGGGCTA TCGCCAATCC GCAAGTGTTA GCGGAAATAG AAAGATTACT TACGGCATAA
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| Protein sequence | MSSTTPLWTP SHERISASNL QQFIAHVNMQ GEAIDSYSSL HQWSVAETRQ FWLEVWQFCD
VIGYRGNCII GEGLPRFGKT MVPARDSIWF PQAQLNYAEN LLSYAFQNPD GIALWFKNEN
GHTKKFSWQQ LCDHVSVVQQ WLAQNGVGEG DVVAGYLPHL PETVIAMLAA TSLGAIWTST
SPDFGVESVI ERFGQVQPKI LFCCNGYTFN GKSFPMQERN AQIASALPSL VNTCQIEYLQ
DRNFTPDFND SFSDWQSIFA SYQPRGVEYR RIGFNDPLFV LYSSGTTGKP KCITHSVGGT
LLNHLKEHQL HCDIQPQDRV FYYTTTGWMM WNWHVSALAS GATLVIYDGH PLYPQAGALW
ALVDEAKVSL FGTSAKYLET LQKNQFSPCD FYSLSHLKTL CSTGSVLYPE QFDYVYEHVK
SDLHLASISG GTDICGCFVL GNPISPVYQG ECQSAGLGLD VVAYNQHGEA IVAERGELVC
RNSFPNQPIG FWHDDGSRYH QAYWDKYPGV WHHGDEIEIT DKGGVLFFGR SDTVLNPGGV
RIGTAEIYQQ VNALPEIHDS IAIGRHIDRD EQVILFVQLA QNVPFNDELQ QKIRSLLRER
CSPRHVPAHI YAISEIPRTK SGKLVELAVK QVCHGDEVKN LGAIANPQVL AEIERLLTA
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