Gene VC0395_0395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0395 
Symbol 
ID5133976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand- 
Start bp440046 
End bp440546 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content47% 
IMG OID640530718 
Productputative deoxycytidylate deaminase 
Protein accessionYP_001215236 
Protein GI147671596 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2131] Deoxycytidylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAACA ACGACATGAT TTCAAAATGG GCGCAACGTT TTTTCCAAAT GGCTGAATTA 
GTTGGCTCGT GGAGTAAAGA TCCTTCCACG CAGGTAGGCG CTGTGATCAC CAAACAAAAC 
CGGATTGTCT CCGTTGGCTT CAATGGCTAC CCACACGGTA TCTCTGACAG TGCCAGCACC 
GATGACCGTG ATATGAAGTA TTTGAAAACG CTGCACGCAG AAGAGAATGC GATTTTGTTT 
GCCAAGCGTG ATTTGGATGG CTGTGAGATT TACGTCACCC ACTTCCCTTG CCCTAATTGC 
GCGGCCAAAA TTATCCAAAC TGGGATCTCT GCCGTACATT GCCCTGAGCA ATCCGAAGAT 
TTTCTGTCAC GCTGGGGCGA TAAGATCAAA GTCAGCCAAG ACATGTTCTT ACAAGCTGGG 
GTTAAAGTGC ATTGGCTACC TTTGGTTGAA CTGAAGCACA TCAATACGAT TGAGCTGCCT 
TCAGAATCGA GCAATCCATA A
 
Protein sequence
MRNNDMISKW AQRFFQMAEL VGSWSKDPST QVGAVITKQN RIVSVGFNGY PHGISDSAST 
DDRDMKYLKT LHAEENAILF AKRDLDGCEI YVTHFPCPNC AAKIIQTGIS AVHCPEQSED 
FLSRWGDKIK VSQDMFLQAG VKVHWLPLVE LKHINTIELP SESSNP