| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0370 |
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| Symbol | ompW |
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| ID | 5134850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 404856 |
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| End bp | 405509 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640530693 |
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| Product | outer membrane protein W |
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| Protein accession | YP_001215211 |
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| Protein GI | 147672252 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3047] Outer membrane protein W |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAA CCATTTGCGG CCTAGCCGTA CTTGCAGCCC TAAGCTCCGC TCCTGTATTT
GCTCACCAAG AAGGTGACTT TATTGTGCGC GCGGGTATTG CCTCGGTAGT ACCTAATGAC
AGTAGCGATA AAGTGTTAAA CACTCAAAGT GAGTTGGCAG TTAATAGCAA TACCCAGTTA
GGGTTAACGC TTGGCTATAT GTTTACTGAC AACATCAGTT TTGAAGTCCT CGCTGCTACG
CCATTTTCAC ATAAGATTTC TACCTCTGGT GGTGAGTTAG GTAGCCTTGG TGATATTGGT
GAAACAAAAC ATTTGCCACC TACCTTTATG GTCCAATACT ACTTTGGTGA AGCTAATTCG
ACTTTCCGTC CATATGTTGG TGCGGGTTTG AATTACACCA CTTTCTTTGA TGAAAGCTTT
AATAGTACGG GTACTAATAA TGCATTGAGT GATTTAAAAC TGGACGACTC ATGGGGACTT
GCTGCTAACG TTGGCTTTGA TTATATGCTC AATGATAGCT GGTTCCTCAA CGCTTCTGTG
TGGTATGCCA ATATTGAAAC AACGGCAACC TACAAAGCAG GTGCAGATGC CAAATCCACG
GATGTTGAAA TCAATCCTTG GGTATTTATG ATCGCGGGTG GTTATAAGTT CTAA
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| Protein sequence | MKQTICGLAV LAALSSAPVF AHQEGDFIVR AGIASVVPND SSDKVLNTQS ELAVNSNTQL
GLTLGYMFTD NISFEVLAAT PFSHKISTSG GELGSLGDIG ETKHLPPTFM VQYYFGEANS
TFRPYVGAGL NYTTFFDESF NSTGTNNALS DLKLDDSWGL AANVGFDYML NDSWFLNASV
WYANIETTAT YKAGADAKST DVEINPWVFM IAGGYKF
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