Gene VC0395_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0354 
Symbol 
ID5133945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp388323 
End bp389384 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content40% 
IMG OID640530677 
Producthypothetical protein 
Protein accessionYP_001215195 
Protein GI147671853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAT CAGCCAGCGA GCAACTTCAA ACCGACATTC CTGCATCTAT TAGCGCTATG 
GTGTTACTAA ATTCTGCATG CCAAGGCGTT GTTGAAACTT ATATTGATCA AGGCAATGCA
GAACATTGGT ATGCTCAGGT AGAACAAAAT TTAAATGCGG TGCAAAAACT GGTACGACAA
TGGCGTTTGA GTGGTAATTT ATATTTTTCA AATGACATTA TGGACAGTGT TCTTTCCATT
GCGAATACAT TCAAAGATTC TAATGTTCAA ATTTTAACGT TATTCAAAGC ACTAGAAACC
CGTTTTGATA CCGCCCAACT ACAGCAGCTC ACTTCATTAA TCTTAACATT ACAAAATCCG
ATTCAAAGTC TTACATCAAA TATAAAACGT TATGATGAGG GATTGAATGC TTGGGCTCGC
CAAGTGGAAG ATGCTCATAA CACATTGCAA CAAACTATTG CACAGATCCA GCAAGAAGAA
GTTTCAATCC AAGCAGAAAT TATCGCCACC AACGCCCAAA TTGATCTAAT GAAACAGCAG
ATAGCAGCAT TTAAAACCGC CATTGCGAAC GCTCAATCGC AGCGTAAGAA AGGGATATTT
GAAACGATTT TTGGCGTGGT GCTTGCTCCG TTTACACTGG GAGGTTCTTT GATATTGGCA
GGGTTTGGTG TTAGCTCTAT TGTAGAAGCA CAAAGTGAAA TATCTAGCCT GCAAAGCGAT
ATCCAATCAT CTTTAAATAC CATCAACCAC GATCAACAAA CGCTCTCTCA AGATCAACAA
CAAATCGCGT CTCTCAATGC CCTATTGCTA AGTGTCGATC AAGTTAACAA CGATTGTGCG
GCGATCAGCC GATCCTTAGA TACACTACAA ACCACGGTGC TCAGTTTATA CAATGAAACC
AACAATGTCG TTTCTAACCT TACCAAAGCA CAAGATTCAC AAGCGGTCAT TCTGGAGCAA
GTTTGGTACC AATCAGCTTA CAATGAGTGG CAAGATATTC TGGAGGTAGC ATCAACGCTC
AATAATGCAC AACCTCAAAT AACAAAAGCT CAAATCAAGT AA
 
Protein sequence
MNQSASEQLQ TDIPASISAM VLLNSACQGV VETYIDQGNA EHWYAQVEQN LNAVQKLVRQ 
WRLSGNLYFS NDIMDSVLSI ANTFKDSNVQ ILTLFKALET RFDTAQLQQL TSLILTLQNP
IQSLTSNIKR YDEGLNAWAR QVEDAHNTLQ QTIAQIQQEE VSIQAEIIAT NAQIDLMKQQ
IAAFKTAIAN AQSQRKKGIF ETIFGVVLAP FTLGGSLILA GFGVSSIVEA QSEISSLQSD
IQSSLNTINH DQQTLSQDQQ QIASLNALLL SVDQVNNDCA AISRSLDTLQ TTVLSLYNET
NNVVSNLTKA QDSQAVILEQ VWYQSAYNEW QDILEVASTL NNAQPQITKA QIK