Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0354 |
Symbol | |
ID | 5133945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 388323 |
End bp | 389384 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640530677 |
Product | hypothetical protein |
Protein accession | YP_001215195 |
Protein GI | 147671853 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAAT CAGCCAGCGA GCAACTTCAA ACCGACATTC CTGCATCTAT TAGCGCTATG GTGTTACTAA ATTCTGCATG CCAAGGCGTT GTTGAAACTT ATATTGATCA AGGCAATGCA GAACATTGGT ATGCTCAGGT AGAACAAAAT TTAAATGCGG TGCAAAAACT GGTACGACAA TGGCGTTTGA GTGGTAATTT ATATTTTTCA AATGACATTA TGGACAGTGT TCTTTCCATT GCGAATACAT TCAAAGATTC TAATGTTCAA ATTTTAACGT TATTCAAAGC ACTAGAAACC CGTTTTGATA CCGCCCAACT ACAGCAGCTC ACTTCATTAA TCTTAACATT ACAAAATCCG ATTCAAAGTC TTACATCAAA TATAAAACGT TATGATGAGG GATTGAATGC TTGGGCTCGC CAAGTGGAAG ATGCTCATAA CACATTGCAA CAAACTATTG CACAGATCCA GCAAGAAGAA GTTTCAATCC AAGCAGAAAT TATCGCCACC AACGCCCAAA TTGATCTAAT GAAACAGCAG ATAGCAGCAT TTAAAACCGC CATTGCGAAC GCTCAATCGC AGCGTAAGAA AGGGATATTT GAAACGATTT TTGGCGTGGT GCTTGCTCCG TTTACACTGG GAGGTTCTTT GATATTGGCA GGGTTTGGTG TTAGCTCTAT TGTAGAAGCA CAAAGTGAAA TATCTAGCCT GCAAAGCGAT ATCCAATCAT CTTTAAATAC CATCAACCAC GATCAACAAA CGCTCTCTCA AGATCAACAA CAAATCGCGT CTCTCAATGC CCTATTGCTA AGTGTCGATC AAGTTAACAA CGATTGTGCG GCGATCAGCC GATCCTTAGA TACACTACAA ACCACGGTGC TCAGTTTATA CAATGAAACC AACAATGTCG TTTCTAACCT TACCAAAGCA CAAGATTCAC AAGCGGTCAT TCTGGAGCAA GTTTGGTACC AATCAGCTTA CAATGAGTGG CAAGATATTC TGGAGGTAGC ATCAACGCTC AATAATGCAC AACCTCAAAT AACAAAAGCT CAAATCAAGT AA
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Protein sequence | MNQSASEQLQ TDIPASISAM VLLNSACQGV VETYIDQGNA EHWYAQVEQN LNAVQKLVRQ WRLSGNLYFS NDIMDSVLSI ANTFKDSNVQ ILTLFKALET RFDTAQLQQL TSLILTLQNP IQSLTSNIKR YDEGLNAWAR QVEDAHNTLQ QTIAQIQQEE VSIQAEIIAT NAQIDLMKQQ IAAFKTAIAN AQSQRKKGIF ETIFGVVLAP FTLGGSLILA GFGVSSIVEA QSEISSLQSD IQSSLNTINH DQQTLSQDQQ QIASLNALLL SVDQVNNDCA AISRSLDTLQ TTVLSLYNET NNVVSNLTKA QDSQAVILEQ VWYQSAYNEW QDILEVASTL NNAQPQITKA QIK
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