Gene VC0395_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0352 
Symbolkbl 
ID5134045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp384999 
End bp386192 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content51% 
IMG OID640530675 
Product2-amino-3-ketobutyrate coenzyme A ligase 
Protein accessionYP_001215193 
Protein GI147671710 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCTG CTTTTTATCA GCAAATCCGT ACTCAGCTTG AGGAAGTGAA AGCTGAGGGG 
CTTTATAAAT CCGAACGTGT GATCACCTCG CAGCAACAAG CGGCGGTCGA AATTTCTACT
GGCGAACAAG TACTGAACTT CTGTGCCAAC AACTATCTTG GCTTGGCCAA TCACCCTGCT
CTGATTGAAG CGGCGAAACA GGGTATGGAC AGCCACGGCT TTGGTATGGC TTCGGTGCGT
TTCATCTGTG GTACGCAAGA TATCCATAAA CAGCTGGAAC AGAAGCTCTC TCAATTCTTA
GGTAAAGAAG ACACCATTCT TTACACCTCA TGCTTTGATG CAAATGCGGG TTTGTTTGAA
ACTCTGCTCG ATAAAGAAGA TGCGATCATC TCTGACGCAC TAAACCACGC TTCAATCATT
GATGGTGTAC GTCTGTGTAA AGCGATGCGT TTTCGCTACT CGAACAACAA CATGGCCGAG
CTGGAAGAGC AACTTATCGC GGCAGATGCT GCTGGCGCTC GCCACAAGTT GATCGTGACG
GATGGCGTGT TCTCAATGGA TGGTGTAGTG GCTAACTTGC CTGCAATCTG TGACTTGGCA
GATAAATACA ACGCCTTAGT GATGGTGGAT GACTCTCACG CGGTAGGCTT CATGGGCGCG
AATGGTCGCG GCACACACGA ATACCACGAT GTGATTGATC GCATCGACAT CATCACCGGC
ACGCTAGGCA AAGCCATGGG CGGTGCATCC GGCGGCTACA CTTCAGGAAA GAAAGAAGTG
ATTGATTGGC TGCGTCAACG TTCACGTCCA TATCTGTTCT CTAACTCGGT TGCACCTTCG
ATTGTTGCGG CGTCACTGCG TGTGTTGGAT CTGCTGCAAG AGAGCGGCGA TCTGCGTGAG
CGCCTATGGG AAAACGCAGC GCACTTCCGT ACTCGTATGG AAGCGGCGGG TTTCACTATG
GGTGGTGCCG ATCACGCCAT CATTCCCATC ATGCTAGGTG ATGCCAAAGT TGCCGCAGAA
TTTGCGGAAC GCGCACTGGC CAAAGGCATT TACGTTATTG GTTTCTCATT CCCGGTTGTA
CCAAAGGGAC AAGCGCGCAT TCGTACGCAA ATGTCAGCCG CACACAGCCG TGAACAACTG
GACAAAGCCA TCGACGCCTT CATTGAAGTG GGTCGTGATA TGGGACTTAT TTAA
 
Protein sequence
MSSAFYQQIR TQLEEVKAEG LYKSERVITS QQQAAVEIST GEQVLNFCAN NYLGLANHPA 
LIEAAKQGMD SHGFGMASVR FICGTQDIHK QLEQKLSQFL GKEDTILYTS CFDANAGLFE
TLLDKEDAII SDALNHASII DGVRLCKAMR FRYSNNNMAE LEEQLIAADA AGARHKLIVT
DGVFSMDGVV ANLPAICDLA DKYNALVMVD DSHAVGFMGA NGRGTHEYHD VIDRIDIITG
TLGKAMGGAS GGYTSGKKEV IDWLRQRSRP YLFSNSVAPS IVAASLRVLD LLQESGDLRE
RLWENAAHFR TRMEAAGFTM GGADHAIIPI MLGDAKVAAE FAERALAKGI YVIGFSFPVV
PKGQARIRTQ MSAAHSREQL DKAIDAFIEV GRDMGLI