| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0349 |
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| Symbol | |
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| ID | 5134332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 382042 |
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| End bp | 382980 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530672 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001215190 |
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| Protein GI | 147672468 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTACTTC CCAAATTGAT TGCTCTTTTG CCCGACCTCG CCACTTTTAT TGTGGTGGTC
AATGAAGGCA GTTTTACCGC TGCGGCCAGC AAACTTGGCG TAACACCTTC TGCGCTCAGT
AAGCTGATTA CTCGCCTTGA GCAAGCCTTG TCGGTCAAGC TGTTTGAACG TACGACGCGC
AAACTCATCA TTACTCAAGC GGGGCAAAAG GTGTATGACC AAAGCTTATT GATGGTCAAT
GCGGCGCAGC AAGCGATCGA AATCTCCAGT TCGGAACATG CCGAGCCTGC TGGTGCACTA
ACTGTTGCTG CGCCAGAGGC GTTTTTAAAT TCCGTATTGC AGCCGTTTGT GGTGCCATTT
CTCGCCCAAT ATCCGCATAT TCAGCTCAAG TTGCGTGCCG CCGATGGTGA CATTGATCTG
TTCAAACACA ATATTGATGT CGCCTTTCGC TTGACGGATA AGCCAGATGA AAACCTCGTG
CTGCGGGAAC TGTGCAAAAC CAATTTGGTG CTGTGTGCCA GCCCTGAATA TTTGGCGCAG
CGTGGCACGC CGATTCACCC CACCGATTTA GCCGAGCATG ATTGCCTCTA CCTCGCGGAA
ACCGATAAAG ATCATATCTG GACGTTTGCC AAAGGCCGTG AAACACACAC AGTTGCTGTG
AGTGGTCGTT ACGCCGTGAA CCAATCGCAG TTACGCTTAA CTGGGGTGAA GAATCATCTC
GGCATCGGGA TTTTCCATGA TTTTGTGGTG CAAGATGCGC TGGCTGCGGG CAAGGTGGTG
CAAGTGCTGC AAGAGTGGAA TATTAAGAGT AATTATCACG GCGCGATTGC CATGCAGTAC
GCGCAAACCA AATACATGCC GGCTCGCCTA CGGGTGTTTA TTGATTTTGT GCTCGAACAC
CTAAGTCCTA AGCTCAATGG TAAGGAATCC ACATGCTAA
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| Protein sequence | MLLPKLIALL PDLATFIVVV NEGSFTAAAS KLGVTPSALS KLITRLEQAL SVKLFERTTR
KLIITQAGQK VYDQSLLMVN AAQQAIEISS SEHAEPAGAL TVAAPEAFLN SVLQPFVVPF
LAQYPHIQLK LRAADGDIDL FKHNIDVAFR LTDKPDENLV LRELCKTNLV LCASPEYLAQ
RGTPIHPTDL AEHDCLYLAE TDKDHIWTFA KGRETHTVAV SGRYAVNQSQ LRLTGVKNHL
GIGIFHDFVV QDALAAGKVV QVLQEWNIKS NYHGAIAMQY AQTKYMPARL RVFIDFVLEH
LSPKLNGKES TC
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