| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0343 |
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| Symbol | |
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| ID | 5135055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 376044 |
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| End bp | 378179 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640530666 |
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| Product | chemotactic transducer-related protein |
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| Protein accession | YP_001215184 |
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| Protein GI | 147671990 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00597283 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAACCTA GCCAAGATGA ACAATACTTA TCTGTGTTAT TTGGCTTAGG TAACATTATG
AAAAAGCGTC GTTATTCCCT ATCTATCCAT ATCAGCAGTC TGTTTTTTAT TCTGATCTTA
TTCATCGGCA GTGTGCTGAT TGCGATCAGT TATTACAGCT CTCAACAGCT TCTGGCGGGT
AGTGCGAGAA CCTTAGCACA CGAGAACAGC AAAAAGCTCG AAACCGTGTT TACCCAAAAT
GTGGCTCCTA TCCTGACCAG TCTCGATTTT CTTGCCACTA GCCGTTTTAT TGAGCACACC
GAACCGCCAC TACAAGATGA ACGTTGGTTA ACCTCAGTAT TACGCGCATT TGAGCAATCT
TCGAACTTAA ATTCGCTCTA TTTTGCCAAT GAAACAGGGC AGTTTTTTAT GTTCCGCCCC
TTACTTAGCC GTGCAGATCG AGTGATGTTT GCGGCACCAG ATGACGCAGT ACTATGGATG
AACTACAGCC ATATCGATGG CACCAACGAC ATCTATTTTC TCAATCAAGA GATGAAATTA
GTCGGGCAAT ATAAAGAGGT CGCCCATTTT TTTGATCCGA GAGTACGCCC TTGGTATCTG
AATGCCGCCA ATGATGGGGT GATCCGCATT ACCGAGCCCT ACCTATTTTT CACTCTCCAA
ACCTATGGGT TAACCTTGTC ACGCCGCTCA TTCAGTGGCA AACAGGTCGT GGGGGCCGAT
TTAACGTTGA AAGCCCTTTC CAGTGAACTG AGTAAACTTG GCTTCTCCGA TCATTCACAA
CTGATCTTGC TGGATCAGCA GCTACGCCCC CTAGCAGAGC ACAATTCAGG GCTCAATCTT
CGCTCCGATC CAGAGCAGAT TAAGCAATCA CTCCTAAATA CTGACACACC GTTTGCTTCT
GTCATGAGCC GCATTACTAG CCAAGCGCAA TACGATACTC CCCATAGTCA AGGTCAAGAT
TGGGTCACTA CCCTCACGCC AGTCAAACTC AACCAGCAGT TGCATCTGTT TTTAGCGCAA
GCGACACCGA AAGATGAACT GCTGGCGGAT CTTATCACCT TACGTAATCG TCAAATCACC
AGTGCGATTG TGTTGCTTCT GTTTTGCTTC CCTGTCGTCA TTTGGGTGGC GAAACGGCTC
TCCAGTCCAT TACACAATCT CATCCAACTG ACTGATAACA TCGCGCGTTT TAACTTCAAA
AAAACGCGCT ACCCACAAAC CATGATTACT GAAGCGGCGA ACTTAAGCCA ATCCATCCAA
TTAATGGAAC ATGCGTTACA CGACCTGCTT CGCTTACTGC GCGAAACCAC TAACAATCAA
GATTTCGCTC AACTGGCAAG AACCATAGCT CACCAGAGTT ATGCCATCAC TAAAGCCGAA
ACCATACTGC TGTATGTGTA TGATCAAGAA AATAATCAAT TCTCTGTTGC CGCCAATCAC
GCCATCATAC CGTTCAAAAT CGATATTAAT CAGCTACTCA GCAGCAGTGC ATGGCTGTTA
GCCGAGCTGC GCAAAGGGGA AACCATCCAC CTCAATCGTA AAGATAATAT TCTGCGCACG
TATCTCGATC AGCTTTACAA CTCAGACTTA TACTTCTTCC CGCTACTGAA CCGCGAGCGT
CAATTAGTCG GGATTGTCTG TTTGGGCTAT GAACGCACCA TAGAAAACGT TCAAGCCGAT
AAACACGCAT TTTTGCGTGA ACTGCTCAGT TTTGCTGAAA TTGCCAAAGA CAACATCGAT
AAAATTCAGC AACAAAAAGA GATGCTGAAG GCGTTCGTCG AACTGATTGC ATCGGCGATT
GATACCAAAT CGCCCTATAC CGGAGGCCAT TGTCAACGCG TTCCTGAATT AACCCGTTTA
TTAGCCGAAG CCGCGGCCAA AGATAAACGC TATTTCGCTG AATTCACGAT GAGTTCCGAA
CAGTGGGAAG AGTTAACCCT CGCGGCTTGG TTGCATGACT GTGGCAAAGT TACCACGCCA
GAATTCGTGG TTGACAAAGC CACTAAGCTG GAAACGATTT ACGACCGGAT CCACGAGGTG
CGCATGCGCT TTGAACTCTT AAAAATGCAA GCGGAGCGTG ATTACTGGCA AAGCTGCGCT
CAAGGGGGGA TCCAAAACAG GCAGAGCAGG CGTTGA
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| Protein sequence | MQPSQDEQYL SVLFGLGNIM KKRRYSLSIH ISSLFFILIL FIGSVLIAIS YYSSQQLLAG
SARTLAHENS KKLETVFTQN VAPILTSLDF LATSRFIEHT EPPLQDERWL TSVLRAFEQS
SNLNSLYFAN ETGQFFMFRP LLSRADRVMF AAPDDAVLWM NYSHIDGTND IYFLNQEMKL
VGQYKEVAHF FDPRVRPWYL NAANDGVIRI TEPYLFFTLQ TYGLTLSRRS FSGKQVVGAD
LTLKALSSEL SKLGFSDHSQ LILLDQQLRP LAEHNSGLNL RSDPEQIKQS LLNTDTPFAS
VMSRITSQAQ YDTPHSQGQD WVTTLTPVKL NQQLHLFLAQ ATPKDELLAD LITLRNRQIT
SAIVLLLFCF PVVIWVAKRL SSPLHNLIQL TDNIARFNFK KTRYPQTMIT EAANLSQSIQ
LMEHALHDLL RLLRETTNNQ DFAQLARTIA HQSYAITKAE TILLYVYDQE NNQFSVAANH
AIIPFKIDIN QLLSSSAWLL AELRKGETIH LNRKDNILRT YLDQLYNSDL YFFPLLNRER
QLVGIVCLGY ERTIENVQAD KHAFLRELLS FAEIAKDNID KIQQQKEMLK AFVELIASAI
DTKSPYTGGH CQRVPELTRL LAEAAAKDKR YFAEFTMSSE QWEELTLAAW LHDCGKVTTP
EFVVDKATKL ETIYDRIHEV RMRFELLKMQ AERDYWQSCA QGGIQNRQSR R
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