| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0339 |
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| Symbol | gnd |
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| ID | 5134574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 371211 |
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| End bp | 372659 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530662 |
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| Product | 6-phosphogluconate dehydrogenase |
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| Protein accession | YP_001215180 |
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| Protein GI | 147671542 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0362] 6-phosphogluconate dehydrogenase |
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| TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00114124 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGTG ATATCGGTGT AATCGGCCTT GCAGTAATGG GCCAGAACCT GATCCTCAAC
ATGAACGACC ACGGCTTCAA AGTGGTGGCA CACAACCGTA CCGCGGCTAA AGTGGACGAG
TTTCTAGAAG GCCCAGCAAA AGGCACTAAC ATTGTTGGCG CTTACACTCT GCAAGAGCTG
GTCGATAAAC TGGCGACGCC ACGCAAAGTG ATGCTGATGG TTCGTGCAGG TCAAGTGGTT
GATGACTTCA TCGAGCAACT GGTTCCACTG CTCGACAAAG GTGACATCAT CATTGATGGT
GGTAACACCA ACTTCCCTGA TACTAACCGC CGTGTCAAAG CGCTGCGTGA AAAAGGCATT
CACTTCATCG GTACGGGTGT TTCTGGTGGT GAAGAAGGTG CACGTTTCGG ACCTTCGATC
ATGCCGGGTG GCGCACCTGA AGCATGGGAA GCGGTAAAAC CGATTTTCCA AGGCATTTCT
GCAAAAACTG ACGCTGGTGA GCCTTGCTGT GACTGGGTGG GCAACGATGG TGCCGGTCAC
TTCGTGAAAA TGGTTCACAA CGGTATCGAA TACGGCGACA TGCAGCTTAT CACTGAAGCT
TACCAGTTCA TGAAAGATGG TCTGGGAATG TCGGCCGATG AAATGCAAGC CGTATTTGCT
GACTGGAACA AAACTGAGCT AGACAGCTAC TTGGTTGAGA TCACCGCTGA CATCCTTGGC
TACAAAGATG AAGATGGTGA AGCGTTGGTT GAGAAGATCC TCGATACTGC TGGCCAAAAA
GGCACAGGTA AATGGACGGG TATCAACGCG CTGGACATGG GCATCCCACT GACTCTGATC
ACCGAATCCG TGTTCTCTCG CTGCCTATCC GCACTGAAAG ATCAACGTGT TGAAGCTGAA
AAACTGTTTG GTAAAACCAA AACTCAAGTC GAAGGTGACA AACAAGTTTG GGTTGATGCG
CTGCGTCAAG CGCTGCTGGC TTCAAAAATC ATCTCTTACG CACAAGGCTT TATGCTGATG
CGTGAAGCAT CGAACGAGAA TGGTTGGAAC CTGAACTACG GTAACGTGGC TCTGATGTGG
CGTGGTGGTT GTATCATCCG CTCTGCGTTC CTAGGCAACA TCCGTGATGC GTTTGAAAAG
AACCCAGAAC TGGCGTTCTT AGGTTCTGAT GCGTACTTCA AAGGTATTCT GAACAACTGT
CTGGCTGCAT GGCGTAAAGT GGCAGCGAAG TCGCTGGAAG TCGGCATTCC AATGCCATGT
ACGACTTCAG CACTGACCTT CCTTGATGGT TACACTACGG CTCGCCTGCC AGCGAACCTG
CTGCAAGCAC AGCGTGATTA CTTTGGTGCG CACACTTATG AGCGTATCGA TCGTCCGCGT
GGTGAGTTCT TCCACACTAA CTGGACGGGT ACAGGCGGTA ATACTGCGTC TACTACTTAC
GACGTGTAA
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| Protein sequence | MKGDIGVIGL AVMGQNLILN MNDHGFKVVA HNRTAAKVDE FLEGPAKGTN IVGAYTLQEL
VDKLATPRKV MLMVRAGQVV DDFIEQLVPL LDKGDIIIDG GNTNFPDTNR RVKALREKGI
HFIGTGVSGG EEGARFGPSI MPGGAPEAWE AVKPIFQGIS AKTDAGEPCC DWVGNDGAGH
FVKMVHNGIE YGDMQLITEA YQFMKDGLGM SADEMQAVFA DWNKTELDSY LVEITADILG
YKDEDGEALV EKILDTAGQK GTGKWTGINA LDMGIPLTLI TESVFSRCLS ALKDQRVEAE
KLFGKTKTQV EGDKQVWVDA LRQALLASKI ISYAQGFMLM REASNENGWN LNYGNVALMW
RGGCIIRSAF LGNIRDAFEK NPELAFLGSD AYFKGILNNC LAAWRKVAAK SLEVGIPMPC
TTSALTFLDG YTTARLPANL LQAQRDYFGA HTYERIDRPR GEFFHTNWTG TGGNTASTTY
DV
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