Gene VC0395_0327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0327 
SymboltonB1 
ID5134173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp358668 
End bp359417 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content50% 
IMG OID640530650 
ProducttonB1 protein 
Protein accessionYP_001215168 
Protein GI147671825 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000000128507 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGGAGA AGGACGTGAA TCTGAACAGA TATGTCATTG CGGGAGGGCT TTCCCTAGCT 
TTTCACGCGC TATTGCTTAT CACGACAGAT GAAGCACAGG TGTTTGCCAT GCCTGCTGGA
AACCCAACTC AATCGGTTTC GATCAATATG GTTTCGATGC CTAAAGTCGC ACCCGCTCAA
CCAGAGCAAA CCCAAACAGA ACAATCAAAA CTGGAATCGG TCAAGCCGAC ACCAGTACAA
GAAGTCGTAA AAACTCCGCC TGCTAAGCCG AAGGTGGAGC CGCACAAACC TAAACCTCAA
ACCGTGAAAA AACCCGTACC GGCTGAGCAA GTCCCATCCA AATCGGTAGC GAAGCCGCAA
CCGGAGAAGG TAGAGCGTAC CGCTGAAATG GCACAAAAGC CTGCGCCAAC GCCTAACCAG
CAACCGAGCC AGCCCACGGC GGCTAGCCAA GGCATCACAA GTCAACCTAT TTTGGTGGAT
AAGCCCGCTT TAGTGAGCGC ACAAGTTCAA CCACGTTATC CACGTATTGC TCGTAAGCGC
GGGATCGAAG GCACTGTGAT GTATGAAATT TGGTTGGATG CGCAAGGTAA TCAAATCAAG
CAGCAATTGC TCTCTTCATC CGGCACAGAA GCCCTAGATC AATCGGCGCT CGAAGCCATT
AAACAGTGGA AATTTTCTCC ACATATTCTT GACGGTGTGC CCGTAGCTCA CCGAATTCAT
ATCCCTATTC GTTTTAAATT GGAAGGCTAA
 
Protein sequence
MREKDVNLNR YVIAGGLSLA FHALLLITTD EAQVFAMPAG NPTQSVSINM VSMPKVAPAQ 
PEQTQTEQSK LESVKPTPVQ EVVKTPPAKP KVEPHKPKPQ TVKKPVPAEQ VPSKSVAKPQ
PEKVERTAEM AQKPAPTPNQ QPSQPTAASQ GITSQPILVD KPALVSAQVQ PRYPRIARKR
GIEGTVMYEI WLDAQGNQIK QQLLSSSGTE ALDQSALEAI KQWKFSPHIL DGVPVAHRIH
IPIRFKLEG