Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0321 |
Symbol | |
ID | 5133952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 354284 |
End bp | 354769 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640530644 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001215162 |
Protein GI | 147672068 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0000162147 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACGTTAG AAAAGAGCCT GACCATGCCT AAGCGTAGTA AAGAAGATAC TGAAGTGACG ATTCAGACCA TTATGGATGC GGTTGTCGAC CAGTTGCTTC GACTGGGTTA TGACAAAATG TCTTACACCA CTCTCAGCCA GCAAACTGGG GTATCCCGAA CTGGGATCAG CCACCATTTC CCGAAGAAAA CCGATTTCGC CTCTGCGTTA GACGGACGCA TATTTAAAAT GTTTATGGAA TACCTCGATT TTGAACACGA CATGGAGGCA TTTCGTGACA GTTGGCTAAA AGCCATGGAG AAATCTGAAT TTGTGGCCAT TTTGCGCCTG CTGTTTCACC ACATTGTGAC AGCGGAGCGT GCACATGATT TTGCTCATAA AGGGGTTAAT CGCCTCTATA AATTGACGGA AGAGAAATTC GGACAAGAGA GCCAAAAAGA AGTGGAATGG TTGCTGGGGC ACTCGTTAGT CAGCATGGTG AATTGA
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Protein sequence | MTLEKSLTMP KRSKEDTEVT IQTIMDAVVD QLLRLGYDKM SYTTLSQQTG VSRTGISHHF PKKTDFASAL DGRIFKMFME YLDFEHDMEA FRDSWLKAME KSEFVAILRL LFHHIVTAER AHDFAHKGVN RLYKLTEEKF GQESQKEVEW LLGHSLVSMV N
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