Gene VC0395_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0311 
Symbol 
ID5133930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp343614 
End bp343964 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content47% 
IMG OID640530634 
Producthypothetical protein 
Protein accessionYP_001215152 
Protein GI147671914 
COG category[S] Function unknown 
COG ID[COG3152] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCTT TACTGACCGC CTATTTACAG GCGTGGAAAC AATACTTTGA TTTTTCAGGG 
CAAACAACCA GAGACGATTT TTGGTGGTTC ATGCTCGCTC ATCTACTGAT CACATTGGTG
GTGGTCAGTA TTGAGATCGC CACAAATAAC CCAGGCTGGT TAGATCTGTT TTACAGCCTC
ATCAGCTTTA TCCCGATGCT CACCATCTTA GTTCGGCGTT TGCATGATAC CCAGCGCTCC
GGATGGTGGG CATGGGTATT TGTGATCCCC GTGATTGGCC CTTTCTGGCT AATTTACTTA
CTGGTTCAGC CCTCTTCCTC CCACTTCACC GATAAGGCAC TTTTATCATG A
 
Protein sequence
MTPLLTAYLQ AWKQYFDFSG QTTRDDFWWF MLAHLLITLV VVSIEIATNN PGWLDLFYSL 
ISFIPMLTIL VRRLHDTQRS GWWAWVFVIP VIGPFWLIYL LVQPSSSHFT DKALLS