Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0294 |
Symbol | malE |
ID | 5134821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 327803 |
End bp | 329023 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640530617 |
Product | maltose ABC transporter periplasmic protein |
Protein accession | YP_001215135 |
Protein GI | 147671546 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2182] Maltose-binding periplasmic proteins/domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.491527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTGAGCC CTACAACACA AAAAGAAAAG GATATGAACA TGAAAAATGC CCTAAGCACA GTCGCGCTGA GCACTCTGGT GGCTCTTGGT TCGTTTGGTG CCCATGCTGC TATTGAAGAA GGACAACTCA CTATTTGGAT CAATGGTGAT AAAGGCTATA ACGGTTTGGC GGAAGTCGGT AAGAAGTTTG AAGCCGACAC CGGAATCAAA GTTACTGTCG CTCATCCTGA TGCGCTACAA GATAAATTCC CACAAACCGC AGCAACAGGT GATGGTCCTG ACATTGTGTT TTGGGCTCAC GACCGTTTTG GCGGTTATGC GGAAGCTGGC CTATTAGTCG AAATCAAACC TTCTGCAAAA ATTCAAGAAG GCATCGTAGA TTTCGCATGG GATGCAGTGA AATACAACGG CAAAATCATT GGTTATCCAA TTGCGGTGGA ATCGTTATCA CTGATTTATA ACAAAGACCT TGTCCCTAAC CCACCGAAAA GCTGGGAAGA AGTCGCTGAG CTGGATGCCA AACTGAAGAA AGAAGGCAAA TCGGCCATCA TGTGGAACCT GAAAGAGCCT TACTTCACTT GGCCTTTGAT GGCGGCTGAT GGCGGTTACG CATTCAAATA CGGTGTTGAT GGCTATGATG TGAAAGACGC AGGTATCAAC AATAAAGGCG TAAAAGACGC GATGAACTTC GTGAAAGGCC TTGTGGATAA AGGCGTGATC TCTCCAGATA TGGATTACTC AGTGTCTGAG TCTGCCTTTA ACCAAGGTAA TACCGCGATG ACCATCAACG GTCCATGGTC TTGGGGCAAC ATCGAGAAAT CAGGCATCAA CTACGGTGTG ACCACTTTGC CTAAATTTAA CGGTCAAGCG TCAAAACCTT TCGTTGGCGT TCTCACCGCA GGTATCAGCA CCGCTTCTCC AAATAAAGAT CTGGCGGTGG AATTCATCGA AAACTATCTG CTGACTAACG ATGGTCTGCG CATGGTAAAC AACGATAAGC CATTAGGTGC GGTTGCGCTG AACTCTTTCC AACGTGAACT GGATGCGGAT GCGCGCATTG CGGCGACCAT GGATAACGCC ATGAACGGCG AAATTATGCC TAACATTCCA CAAATGAACG CGTTTTGGAG CTCTGCGAAA AACGCCATCA TCAACATCGT TGATGGTCGT CAAACCGTGG ATGCCGCTCT GGCTGATGCT GAAAAGCAGA TGACGAAATA A
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Protein sequence | MVSPTTQKEK DMNMKNALST VALSTLVALG SFGAHAAIEE GQLTIWINGD KGYNGLAEVG KKFEADTGIK VTVAHPDALQ DKFPQTAATG DGPDIVFWAH DRFGGYAEAG LLVEIKPSAK IQEGIVDFAW DAVKYNGKII GYPIAVESLS LIYNKDLVPN PPKSWEEVAE LDAKLKKEGK SAIMWNLKEP YFTWPLMAAD GGYAFKYGVD GYDVKDAGIN NKGVKDAMNF VKGLVDKGVI SPDMDYSVSE SAFNQGNTAM TINGPWSWGN IEKSGINYGV TTLPKFNGQA SKPFVGVLTA GISTASPNKD LAVEFIENYL LTNDGLRMVN NDKPLGAVAL NSFQRELDAD ARIAATMDNA MNGEIMPNIP QMNAFWSSAK NAIINIVDGR QTVDAALADA EKQMTK
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