Gene VC0395_0294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0294 
SymbolmalE 
ID5134821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp327803 
End bp329023 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content47% 
IMG OID640530617 
Productmaltose ABC transporter periplasmic protein 
Protein accessionYP_001215135 
Protein GI147671546 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2182] Maltose-binding periplasmic proteins/domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.491527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTGAGCC CTACAACACA AAAAGAAAAG GATATGAACA TGAAAAATGC CCTAAGCACA 
GTCGCGCTGA GCACTCTGGT GGCTCTTGGT TCGTTTGGTG CCCATGCTGC TATTGAAGAA
GGACAACTCA CTATTTGGAT CAATGGTGAT AAAGGCTATA ACGGTTTGGC GGAAGTCGGT
AAGAAGTTTG AAGCCGACAC CGGAATCAAA GTTACTGTCG CTCATCCTGA TGCGCTACAA
GATAAATTCC CACAAACCGC AGCAACAGGT GATGGTCCTG ACATTGTGTT TTGGGCTCAC
GACCGTTTTG GCGGTTATGC GGAAGCTGGC CTATTAGTCG AAATCAAACC TTCTGCAAAA
ATTCAAGAAG GCATCGTAGA TTTCGCATGG GATGCAGTGA AATACAACGG CAAAATCATT
GGTTATCCAA TTGCGGTGGA ATCGTTATCA CTGATTTATA ACAAAGACCT TGTCCCTAAC
CCACCGAAAA GCTGGGAAGA AGTCGCTGAG CTGGATGCCA AACTGAAGAA AGAAGGCAAA
TCGGCCATCA TGTGGAACCT GAAAGAGCCT TACTTCACTT GGCCTTTGAT GGCGGCTGAT
GGCGGTTACG CATTCAAATA CGGTGTTGAT GGCTATGATG TGAAAGACGC AGGTATCAAC
AATAAAGGCG TAAAAGACGC GATGAACTTC GTGAAAGGCC TTGTGGATAA AGGCGTGATC
TCTCCAGATA TGGATTACTC AGTGTCTGAG TCTGCCTTTA ACCAAGGTAA TACCGCGATG
ACCATCAACG GTCCATGGTC TTGGGGCAAC ATCGAGAAAT CAGGCATCAA CTACGGTGTG
ACCACTTTGC CTAAATTTAA CGGTCAAGCG TCAAAACCTT TCGTTGGCGT TCTCACCGCA
GGTATCAGCA CCGCTTCTCC AAATAAAGAT CTGGCGGTGG AATTCATCGA AAACTATCTG
CTGACTAACG ATGGTCTGCG CATGGTAAAC AACGATAAGC CATTAGGTGC GGTTGCGCTG
AACTCTTTCC AACGTGAACT GGATGCGGAT GCGCGCATTG CGGCGACCAT GGATAACGCC
ATGAACGGCG AAATTATGCC TAACATTCCA CAAATGAACG CGTTTTGGAG CTCTGCGAAA
AACGCCATCA TCAACATCGT TGATGGTCGT CAAACCGTGG ATGCCGCTCT GGCTGATGCT
GAAAAGCAGA TGACGAAATA A
 
Protein sequence
MVSPTTQKEK DMNMKNALST VALSTLVALG SFGAHAAIEE GQLTIWINGD KGYNGLAEVG 
KKFEADTGIK VTVAHPDALQ DKFPQTAATG DGPDIVFWAH DRFGGYAEAG LLVEIKPSAK
IQEGIVDFAW DAVKYNGKII GYPIAVESLS LIYNKDLVPN PPKSWEEVAE LDAKLKKEGK
SAIMWNLKEP YFTWPLMAAD GGYAFKYGVD GYDVKDAGIN NKGVKDAMNF VKGLVDKGVI
SPDMDYSVSE SAFNQGNTAM TINGPWSWGN IEKSGINYGV TTLPKFNGQA SKPFVGVLTA
GISTASPNKD LAVEFIENYL LTNDGLRMVN NDKPLGAVAL NSFQRELDAD ARIAATMDNA
MNGEIMPNIP QMNAFWSSAK NAIINIVDGR QTVDAALADA EKQMTK