Gene VC0395_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0289 
Symbol 
ID5134377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand+ 
Start bp324300 
End bp324917 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content47% 
IMG OID640530612 
ProductSM-20-related protein 
Protein accessionYP_001215130 
Protein GI147672430 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3751] Predicted proline hydroxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.348615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAATCA TGGCGTTAGA TGGATTAATG GATGCAATTG CAGACCGAGG TTGGTATGTG 
TGGGATGATT TTTTGAACCC ACAAGAAGTG CAAGCTCTAC GAGAGTGCAT TCCTGAACGT 
TGGAAACGAG CAAAAATTGG TAGAAACGAA GAGATTCAGC GTGCTGCGGA TATCCGGAGC 
GATAAAATCC AATGGCTTGA TCTATCAATG GGGCAACCTG TTCAAGACTA TTTGGAGCGG 
ATGGAGCAGA TCCGGTGTGA AGTGAACCGC CACTTTTTTC TTGGGCTGTT TGAATATGAA 
GCGCACTTTG CAAAATACGA GGCCGGTGAT TTCTACCTTA AACATCTCGA CTCGTTTCGC 
GGTAATGAAA ACCGCAAATT AACCACGGTG TTTTATCTCA ATGAAAATTG GACTCCTGCC 
GATGGCGGCG AATTAAAAAT CTACGATTTG CAGGATAACT GGATTGAAAC GTTAGCGCCC 
GTTGCGGGAC GTCTGGTGGT ATTTCTTTCG GAACGATTCC CTCATGAAGT GCTCGAAGCG 
CATGCGGACC GCGTCAGTAT CGCGGGCTGG TTTCGAACCA ATGGTGTGAG CGGTAATAAG 
CTGGATATTG CAAACTAA
 
Protein sequence
MRIMALDGLM DAIADRGWYV WDDFLNPQEV QALRECIPER WKRAKIGRNE EIQRAADIRS 
DKIQWLDLSM GQPVQDYLER MEQIRCEVNR HFFLGLFEYE AHFAKYEAGD FYLKHLDSFR 
GNENRKLTTV FYLNENWTPA DGGELKIYDL QDNWIETLAP VAGRLVVFLS ERFPHEVLEA 
HADRVSIAGW FRTNGVSGNK LDIAN