| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0283 |
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| Symbol | |
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| ID | 5134651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 319193 |
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| End bp | 320212 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640530606 |
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| Product | GGDEF family protein |
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| Protein accession | YP_001215124 |
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| Protein GI | 147671516 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.286485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATGACAA CTGAAGATTT CAAAAAATCC ACGGCTAACT TAAAAAAAGT CGTACCTTTA
ATGATGAAAC ATCATGTCGC GGCCACCCCC GTGAACTATG CCTTGTGGTA TACCTACGTC
GACCAAGCCA TTCCGCAACT GAATGCGGAA ATGGACTCTG TATTGAAAAA TTTTGGGCTT
TGCCCACCCG CTTCTGGTGA ACATCTTTAC CAACAATACA TTGCGACCAA AGCAGAAACC
AATATTAATC AGTTACGTGC GAATGTTGAG GTACTTCTTG GTGAAATTAG CAGTTCAATG
AGTGATACGC TCAGTGACAC CAGTTCCTTT GCTAATGTGA TTGATAAAAG CTTTAAGGAT
TTAGAGCGCG TCGAGCAAGA CAATCTCTCG ATTGAAGAAG TAATGACGGT GATCCGCCGC
TTGGTGAGTG ACTCTAAAGA TATTCGACAC TCAACCAATT TCCTAAATAA TCAACTGAAC
GCGGCAACAC TAGAAATCTC TCGTCTTAAA GAGCAGCTGG CGAAAGTTCA GAAAGATGCT
CTGTTTGACA GTTTATCTGG ACTCTATAAC CGCCGAGCTT TTGATGGCGA TATGTTCACG
CTGATCCATG CAGGTCAACA AGTCAGCCTG ATCATGCTCG ACATCGACCA CTTCAAAGCC
CTTAATGATA ACTATGGCCA CCTGTTTGGT GACCAAATTA TCCGTGCGAT CGCCAAACGT
CTTCAAAGCC TATGCCGTGA CGGCGTGACA GCTTATCGTT ATGGCGGTGA AGAGTTTGCA
CTGATTGCTC CGCACAAATC GCTGCGTATT GCACGCCAGT TTGCTGAATC GGTGCGACGT
TCAATAGAAA AGCTCACCGT AAAAGATCGG CGTAGCGGTC AATCGGTCGG TAGCATTACC
GCTTCGTTTG GTGTAGTAGA AAAGATTGAA GGTGACTCTT TGGAGTCTCT TATCGGTCGA
GCGGATGGAT TGCTGTATGA AGCGAAAAAT CTGGGCCGCA ATCGAGTCAT GCCGCTCTAA
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| Protein sequence | MMTTEDFKKS TANLKKVVPL MMKHHVAATP VNYALWYTYV DQAIPQLNAE MDSVLKNFGL
CPPASGEHLY QQYIATKAET NINQLRANVE VLLGEISSSM SDTLSDTSSF ANVIDKSFKD
LERVEQDNLS IEEVMTVIRR LVSDSKDIRH STNFLNNQLN AATLEISRLK EQLAKVQKDA
LFDSLSGLYN RRAFDGDMFT LIHAGQQVSL IMLDIDHFKA LNDNYGHLFG DQIIRAIAKR
LQSLCRDGVT AYRYGGEEFA LIAPHKSLRI ARQFAESVRR SIEKLTVKDR RSGQSVGSIT
ASFGVVEKIE GDSLESLIGR ADGLLYEAKN LGRNRVMPL
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