| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0281 |
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| Symbol | |
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| ID | 5134618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 316830 |
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| End bp | 318347 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530604 |
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| Product | hypothetical protein |
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| Protein accession | YP_001215122 |
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| Protein GI | 147672118 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.985205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGTGT CTAAAAGTCT TGTTCGACAG TCCCATTTTC TGGGCACTAA AGTCAGAAAC
CTTCGGAAAA GGAACCACTT AACCATGGAG GATCTTTCTG CGCGCTGCAT TCGTGTTAGC
CCTGAATACG CACCATCGGT TTCTTATCTC TCTATGATTG AGCGCGGAAA ACGAGTACCG
AGCGTTGAGA TGCTGGAAGT GATCGCGGAA GTGTTTCAAA AAGATCCCAT CTGGTTTTTA
GATGATGAGC CAGAGCAAAT TGATATCACT CCCGAAAAAG GCAATCGTGG TGGCATTAGT
GGAATGGCTC TTGAGCCCAG TTTTTTGTTT TCCAATGATA TTTTACAAAT CGCTATTCCC
GAGATGCTCT CGCAAACTGG GATCACTGGC CGCCAATTTG CTCATCTCTT GATCCGAGCC
CATCAAGAAA GTCTGCAAAA TCATTTCCCA GATCTTGAAC GCGCTGCAGA AGAGGTGGGG
CTAAAACGCC TTAATTTATC TGTCACCGAT TTGCTGGACA TTGCCAAAGG GCTTGGATTG
GACGTGCGTT GGGTAAAGCG TACGCCGCAT GATGTAACAG ACGAACTTGG GGTGAGTGCC
AAACAGCTCG TTACCTCTTT TTTTGAGCCG CCAGGCCGCA TTTACCTAAA TGAGATCCTG
CGTGAATACC CAACGCGATT GAAATATGAC CTTGCGGTTT ATATCGGACA TAATGTGCTG
CACAACAAAG ATGGCCTAAA AAGTGTCCTC TCCGTCGGCC ACACTCAAGG GTGGGATGAG
ATGGTGGAAA CCTCCCCCTC TTCAGAGCTG AATTCACAAG ATATCTTGCA AGCTTGGCGA
GATTTTGAAT CCAGCTTTTT TGCTGGGGCA CTGCTGTGCC CTAAGGTGCC CTTCCGGCAA
CTGCTCGATC GTAACGGATA TGAAATCAGC GTTCATCAGA AAGCGGGAGT CTCACCTTCT
GTCGCCATGC GGCGGATGAC CGTCGTTTCG CCCTATCCCC ACTGGCACTA TTTTGATGCC
TATGGTGAAG GGAAACTCAA GGCCGTATAC CGTGGAAATG GTATCCCACT TCCTTGGGGA
AATATGCGTA AAGTGAATGA TCCTTGTCAG CATTGGGCCG TTTTTCGTCG TCTTTCACAA
CCACAGCAAG GCAGTTCAGC CCAAATTTCG ATTTTAACTG TGGGCGACGA GCCTCGAATT
TACTGTTGTG AATCACTCAA TGTTGTGGAT CCTGCCGGCA ACAACCGTGT CTTGTGTGCG
GGCATCGACC TCAATCCTGC GATTAATGCA CAAGGTGGGG ACGCTCTCGC CATTGCTCAA
GAGCTCAAAA TGAGTTGTGT GCAGAAAGGA GGAACTACCG CGATTCCAGC GCCGATTAAA
CGTGATTTGC GCACTATCGC CAAAATTCTC AACATCAACT GGGTTGAACG AGGTATCGAG
AATGAAGCGA GATTAATTTG CTCACGCGGT GCGGTTTGTC CACGAAAGCC AAGATGCTAT
GGCGAATGTG GTGAATAA
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| Protein sequence | MSVSKSLVRQ SHFLGTKVRN LRKRNHLTME DLSARCIRVS PEYAPSVSYL SMIERGKRVP
SVEMLEVIAE VFQKDPIWFL DDEPEQIDIT PEKGNRGGIS GMALEPSFLF SNDILQIAIP
EMLSQTGITG RQFAHLLIRA HQESLQNHFP DLERAAEEVG LKRLNLSVTD LLDIAKGLGL
DVRWVKRTPH DVTDELGVSA KQLVTSFFEP PGRIYLNEIL REYPTRLKYD LAVYIGHNVL
HNKDGLKSVL SVGHTQGWDE MVETSPSSEL NSQDILQAWR DFESSFFAGA LLCPKVPFRQ
LLDRNGYEIS VHQKAGVSPS VAMRRMTVVS PYPHWHYFDA YGEGKLKAVY RGNGIPLPWG
NMRKVNDPCQ HWAVFRRLSQ PQQGSSAQIS ILTVGDEPRI YCCESLNVVD PAGNNRVLCA
GIDLNPAINA QGGDALAIAQ ELKMSCVQKG GTTAIPAPIK RDLRTIAKIL NINWVERGIE
NEARLICSRG AVCPRKPRCY GECGE
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