Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0281 |
Symbol | |
ID | 5134618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 316830 |
End bp | 318347 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640530604 |
Product | hypothetical protein |
Protein accession | YP_001215122 |
Protein GI | 147672118 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.985205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGTGT CTAAAAGTCT TGTTCGACAG TCCCATTTTC TGGGCACTAA AGTCAGAAAC CTTCGGAAAA GGAACCACTT AACCATGGAG GATCTTTCTG CGCGCTGCAT TCGTGTTAGC CCTGAATACG CACCATCGGT TTCTTATCTC TCTATGATTG AGCGCGGAAA ACGAGTACCG AGCGTTGAGA TGCTGGAAGT GATCGCGGAA GTGTTTCAAA AAGATCCCAT CTGGTTTTTA GATGATGAGC CAGAGCAAAT TGATATCACT CCCGAAAAAG GCAATCGTGG TGGCATTAGT GGAATGGCTC TTGAGCCCAG TTTTTTGTTT TCCAATGATA TTTTACAAAT CGCTATTCCC GAGATGCTCT CGCAAACTGG GATCACTGGC CGCCAATTTG CTCATCTCTT GATCCGAGCC CATCAAGAAA GTCTGCAAAA TCATTTCCCA GATCTTGAAC GCGCTGCAGA AGAGGTGGGG CTAAAACGCC TTAATTTATC TGTCACCGAT TTGCTGGACA TTGCCAAAGG GCTTGGATTG GACGTGCGTT GGGTAAAGCG TACGCCGCAT GATGTAACAG ACGAACTTGG GGTGAGTGCC AAACAGCTCG TTACCTCTTT TTTTGAGCCG CCAGGCCGCA TTTACCTAAA TGAGATCCTG CGTGAATACC CAACGCGATT GAAATATGAC CTTGCGGTTT ATATCGGACA TAATGTGCTG CACAACAAAG ATGGCCTAAA AAGTGTCCTC TCCGTCGGCC ACACTCAAGG GTGGGATGAG ATGGTGGAAA CCTCCCCCTC TTCAGAGCTG AATTCACAAG ATATCTTGCA AGCTTGGCGA GATTTTGAAT CCAGCTTTTT TGCTGGGGCA CTGCTGTGCC CTAAGGTGCC CTTCCGGCAA CTGCTCGATC GTAACGGATA TGAAATCAGC GTTCATCAGA AAGCGGGAGT CTCACCTTCT GTCGCCATGC GGCGGATGAC CGTCGTTTCG CCCTATCCCC ACTGGCACTA TTTTGATGCC TATGGTGAAG GGAAACTCAA GGCCGTATAC CGTGGAAATG GTATCCCACT TCCTTGGGGA AATATGCGTA AAGTGAATGA TCCTTGTCAG CATTGGGCCG TTTTTCGTCG TCTTTCACAA CCACAGCAAG GCAGTTCAGC CCAAATTTCG ATTTTAACTG TGGGCGACGA GCCTCGAATT TACTGTTGTG AATCACTCAA TGTTGTGGAT CCTGCCGGCA ACAACCGTGT CTTGTGTGCG GGCATCGACC TCAATCCTGC GATTAATGCA CAAGGTGGGG ACGCTCTCGC CATTGCTCAA GAGCTCAAAA TGAGTTGTGT GCAGAAAGGA GGAACTACCG CGATTCCAGC GCCGATTAAA CGTGATTTGC GCACTATCGC CAAAATTCTC AACATCAACT GGGTTGAACG AGGTATCGAG AATGAAGCGA GATTAATTTG CTCACGCGGT GCGGTTTGTC CACGAAAGCC AAGATGCTAT GGCGAATGTG GTGAATAA
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Protein sequence | MSVSKSLVRQ SHFLGTKVRN LRKRNHLTME DLSARCIRVS PEYAPSVSYL SMIERGKRVP SVEMLEVIAE VFQKDPIWFL DDEPEQIDIT PEKGNRGGIS GMALEPSFLF SNDILQIAIP EMLSQTGITG RQFAHLLIRA HQESLQNHFP DLERAAEEVG LKRLNLSVTD LLDIAKGLGL DVRWVKRTPH DVTDELGVSA KQLVTSFFEP PGRIYLNEIL REYPTRLKYD LAVYIGHNVL HNKDGLKSVL SVGHTQGWDE MVETSPSSEL NSQDILQAWR DFESSFFAGA LLCPKVPFRQ LLDRNGYEIS VHQKAGVSPS VAMRRMTVVS PYPHWHYFDA YGEGKLKAVY RGNGIPLPWG NMRKVNDPCQ HWAVFRRLSQ PQQGSSAQIS ILTVGDEPRI YCCESLNVVD PAGNNRVLCA GIDLNPAINA QGGDALAIAQ ELKMSCVQKG GTTAIPAPIK RDLRTIAKIL NINWVERGIE NEARLICSRG AVCPRKPRCY GECGE
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