Gene VC0395_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0278 
Symbol 
ID5134100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand- 
Start bp314227 
End bp314835 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content46% 
IMG OID640530601 
Producthypothetical protein 
Protein accessionYP_001215119 
Protein GI147671431 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAA AACTGTTTTT GGATACTCAT TCCGCTTCTG GCGAGATAAA GTTAACTGAT 
GGTTTACTCT ACTGGTTTCC GCAATTTCTC ACCCCGATTC AAGCCGACCA AGCTTTTCAG 
CAAATGCTCA CACACTTGGA TTGGCAGCAG AAAAGTATTC GTCTATTTGG TAAAAGCGTG 
CTTCAACCGC GACTTATCGC TTGGTATGGA GAAAAAGGCT ACCGTTATTC AGGTCTCTCT 
TTATCTGCTC AACCCTTCCC GCCACCGTTG CTTACTTTAA AGACGCAGTG CGAACAGGCC 
GCACAAGCCC CCTTTAATTC TGTACTCGCG AATCTTTATC GCGATGGGCA AGACTCGATG 
GGCTGGCATC AAGACAATGA GCCAGAATTA GGCTCTAATC CGGTAATTGC CTCCCTCTCT 
TTAGGAGAGA GTCGCCGATT TCTGTTGCGC CATCACAAGG ATCATGCGTT GCAAGTCGAA 
TGCGAATTGA ATCATGGGGA TTTGCTGATT ATGGCAGGGA ACACTCAGCA CTTCTGGCAA 
CACGCTATCC CTAAAACTCG TCAAACCAAG CAAACACGGA TTAATCTTAC TTTCCGTAAT 
ATTCTTTAA
 
Protein sequence
MMKKLFLDTH SASGEIKLTD GLLYWFPQFL TPIQADQAFQ QMLTHLDWQQ KSIRLFGKSV 
LQPRLIAWYG EKGYRYSGLS LSAQPFPPPL LTLKTQCEQA AQAPFNSVLA NLYRDGQDSM 
GWHQDNEPEL GSNPVIASLS LGESRRFLLR HHKDHALQVE CELNHGDLLI MAGNTQHFWQ 
HAIPKTRQTK QTRINLTFRN IL