| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0271 |
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| Symbol | |
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| ID | 5134041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 308118 |
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| End bp | 308966 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530594 |
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| Product | pirin family protein |
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| Protein accession | YP_001215112 |
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| Protein GI | 147672245 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAG ACCGCGAAAT TCGCCAAACA GTTCCCGCAC AACCCACCTC AGATGGTGAT
GGTGTCAAAA TTCAGCGTAT TGCAGGATTT CAACGCCCCA ATTTCTCGCC GTTTTTGATG
CTCGATGAAC TGAAAGCCGA TTCTCAAGCC GACTACATCG GTGGTTTTCC GCCTCATCCA
CATCGCGGTA TTGAAACCTT GACTTATATG CTGCAAGGGC ATTTTCAGCA CCGAGATCAG
ATGGGAAATG TGGGCGAATT ACGATCCGGC GGCGCGCAAT GGATGGCAGC AGGACGTGGC
GTGATCCACA GTGAAATGCC GATTATGCAA GAAGGGCAAT TGCACGGCTT CCAAATCTGG
ATTAACCAGC CGGCTCGCAA CAAGATGTCG CCTGCGAAAT ATCAAGATTT CCAGCCTGAA
AGTATTGTTG AACACCATCA TCCACAACAA GGTTTACTGC GCGTGATTGC CGGTTCCGTC
GAGATTGAGG ATCAAACGAT AACAGGCCCA TTAACCGATA CTGGCGTGCC TGCCACCGTT
GTCGATTGGC GAGCAGAAGC GGGGCAAGAC ATCAGCATCA ACACACCGCC TCACTTTAAT
GCCATGTTGT ACGTCTATCG TGGGAGCCTG AACGTTGGGA AACAGTCGGT CAAAGCAGGA
CACATGGCCA TGCTGACAGC CGGAGAACAG CTCACCCTGC GTGCAGAGCA ACCTTGCGGC
AGCTTGCTTT TAATGGGGCA ACCCATCGAT GAACCCGTTG TGCATTATGG ACCATTCGTG
ATGAACAGCA TGGCTGAGAT TGAGCAAGCG ATCCGCGATT ACAATGCAGG GCATTTTGAG
ACCTACTGA
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| Protein sequence | MTKDREIRQT VPAQPTSDGD GVKIQRIAGF QRPNFSPFLM LDELKADSQA DYIGGFPPHP
HRGIETLTYM LQGHFQHRDQ MGNVGELRSG GAQWMAAGRG VIHSEMPIMQ EGQLHGFQIW
INQPARNKMS PAKYQDFQPE SIVEHHHPQQ GLLRVIAGSV EIEDQTITGP LTDTGVPATV
VDWRAEAGQD ISINTPPHFN AMLYVYRGSL NVGKQSVKAG HMAMLTAGEQ LTLRAEQPCG
SLLLMGQPID EPVVHYGPFV MNSMAEIEQA IRDYNAGHFE TY
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