| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0257 |
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| Symbol | |
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| ID | 5134459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 294155 |
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| End bp | 295054 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530580 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001215098 |
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| Protein GI | 147671871 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGCCG ATGACTTAAT TTTGTTTTAT CAAGTGATTG AATTGGGGAG TTTCAGTAAG
GTTGCAGAGC AAAATGGCCT TACAAATTCG GTGGTTAGCA AAAGATTGGC GCGATTGGAA
GAGGAACTTG GCGTGCAGCT ATTGTATCGA ACAACGCGTA AATTGACCTT GACTGAGGCA
GGCAAGGCAC TGTTGCACGG TGCTAAAAAT GTGAAGCAAG CCACTCAAGA AGCGCTGGAC
GCGGTGGTGG GATTTGGCGA AAACGTCAGC GGTCACATCA AAATGTCGGT GCCGACCATC
TCGGGTGACT TGATTTTAGC TGATGCGGTC GCTGAGTTTT GTAACCTGCA TCCGGGGCTG
ACGGTGGATA TGTCGCTGGA TAATCGCTTC GTAGATCTTG TTGAAGGCGG CTATGACTTG
GTGATCCGCA CCGGTTATTT GGAAGATTCG AGTTTGATTG CGCGGCATAT TTTGGACTCG
CAGTGGGTAG TGTGCGCGTC TCCCGCTTAC ATTGCCCGCA ACGGTAAGCC ACTCAAGCCA
GAAGATTTAG CTAGACACAA CTGCTTGCAA TACGCCTATC AAACCACGGG GGCGACCGAT
TGGGAATTTA AAGGGGCAAA AGGCAACTAC ATAGTTAAAG TATCCGGCAC CTTTTCGACC
GATAACGCCA CCGCACTGCG CAAAGCCGCG CTTGGTGGGC ATGGCATTGC TTATGTACCG
CGCTGTTTGG TGTATCACGA TTTTCGTAAT GGCGAATTGG TGGATGTGTT TCCAGAACAG
GTCGGCAAAA AACTTGGTAT CTACGCAGTT TATCCATTCA CGCGCCAACC GCCCAACAAA
GTGCGTTTGT TGATTGAGCA CATACGTGCC CGTTATTTAG CGATATCACA TTATTTTTAA
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| Protein sequence | MRADDLILFY QVIELGSFSK VAEQNGLTNS VVSKRLARLE EELGVQLLYR TTRKLTLTEA
GKALLHGAKN VKQATQEALD AVVGFGENVS GHIKMSVPTI SGDLILADAV AEFCNLHPGL
TVDMSLDNRF VDLVEGGYDL VIRTGYLEDS SLIARHILDS QWVVCASPAY IARNGKPLKP
EDLARHNCLQ YAYQTTGATD WEFKGAKGNY IVKVSGTFST DNATALRKAA LGGHGIAYVP
RCLVYHDFRN GELVDVFPEQ VGKKLGIYAV YPFTRQPPNK VRLLIEHIRA RYLAISHYF
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