| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0246 |
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| Symbol | |
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| ID | 5134399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 278740 |
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| End bp | 279666 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530569 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001215087 |
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| Protein GI | 147671628 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGT TTGCAGATAT GGTGTTATTT GCCAGCATAG TCAAAAACCA AGGTTTGGCG
GCCGCTGGCC GAGAGTTGAG TTTATCGCCC GCAACAGTAA CGGCAAGGCT ACAAGCGCTG
GAAGATCGCT ATGGAGTCAA ATTGCTCAAT CGCAGCACTC GCCATCTCTC CTTAACCGAA
TCTGGCGTTT TGTATCATCA AGCTTGCCTT GAGATTCTGA ATAGCGTGCG CGAGACAGAA
AATTTGCTGC AAACAGGCAG CAAAGAAGTC CGGGGAACGC TAAAAGTCTC TGCTCCGCGT
GACATCGGGA AGCAACATAT CGCTCCGATT CTTGCCGCTT TCACTGAGCA ATATCCGGAA
GTGGTGCCCT ATCTCTACCT CAATGACAAC ATCTCGAATT TGGCGGAATC AGGTTTGGGT
GTGGTGATCC GCTACGGTGA ACTGGCCGAC AGCAGTCTAA TTTCACGCAA GCTGGCGCCG
AGTCGCCGAG TGTTGTGCGC TTCTCCGGCT TATTTAGCGC GTAAAGGCAC ACCGAAAACT
CCACAAGATC TCGTTCAACA CGACTGTTTG GCCATGGTTC GCAGCAATGA AGAGATGAAA
ACCTGGCACT TCCAAGAGAA TGAGCAGCAC AAGGTGATCA CGATAGTACC CAAGAGTTTT
GCGGATGATG GGGAAGTGAT TCGCCAGTGG GCTTTAGCGG GAATGGGGAT CGCGTTGAAA
TCGATCCTCG ATGTGCAGGA CGATCTCAAT CAGCAGCGGT TGGTCACTGT TCTCGATGGT
TACATGAAGA ATTTTAACGC CTCCACTTCT GCTTCAGGGG CGGATTTGAA TGTGCTTTAT
CTCAGCCGCC AATACCAGCC CAAACGCCTG CGATTGTTTA TCGACTTTTT GATTGAGCAG
TGTGCGTTGC GCTTAGGAAA CCAATAG
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| Protein sequence | MDKFADMVLF ASIVKNQGLA AAGRELSLSP ATVTARLQAL EDRYGVKLLN RSTRHLSLTE
SGVLYHQACL EILNSVRETE NLLQTGSKEV RGTLKVSAPR DIGKQHIAPI LAAFTEQYPE
VVPYLYLNDN ISNLAESGLG VVIRYGELAD SSLISRKLAP SRRVLCASPA YLARKGTPKT
PQDLVQHDCL AMVRSNEEMK TWHFQENEQH KVITIVPKSF ADDGEVIRQW ALAGMGIALK
SILDVQDDLN QQRLVTVLDG YMKNFNASTS ASGADLNVLY LSRQYQPKRL RLFIDFLIEQ
CALRLGNQ
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