Gene VC0395_0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0240 
Symbol 
ID5134404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp271540 
End bp272583 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content52% 
IMG OID640530562 
ProductOye family NADH-dependent flavin oxidoreductase 
Protein accessionYP_001215080 
Protein GI147671756 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATA TTCTTTTTCA GCCATACGCG CTCAATGATG TGATTACTTT AAACAACCGA 
ATTGCGATGG CGCCACTGAC GCGCTGCATG GCTGATGATG ATTTGGTGCC GACCGATGCC
ATGGTGGCGT ATTACGCACG CCGTGCCGAT GCTGGGCTGA TCATTTCCGA AGCCACCATT
ATTCGCCCCG ATGCTCAAGG CTACCCGAAC ACTCCGGGGC TGTTTACGCA GGCGCAAATT
ACCGGTTGGA AAAAAGTAAC GGATGCCGTG CATGCTAATG GCGGTAAGAT TTTCGCTCAG
TTATGGCATA CCGGACGCGT GGCTCACCCT GCCTTTTTTG CGGGTGAATA CGTTCTAGCG
CCTTCAGCTC TCGGTGTAGA AGGCAGCGTG CCACGCCGCC GCGAATTGCA GTACACAGTG
CCGAAAGCGG CGAGCCAAGC GGAGATCAAG CAACTGGTGG CCGATTACGC ACAAGCGGCG
GAAAATGCAC GCTTGGCGGG TTTTGATGGC GTCGAGATTC ATGGCGCGAA CGGCTATCTC
ATCGACCAGT TCCTGCATTT TGATTCGAAC CAACGCAGCG ATGAGTACGG TGAAACGCCG
GCCAATATGG CGCGTTTTGC TTTGGAAGTG GTGGATGCGG TGATCGCACG TATTGGCGCA
GAGCGCACCG CGCTGCGTAT GTCTCCGGGG GCGTATTTCA ACATCAAAGC TGACCCGCGT
GATCGTGAAG TGTTTGATTA TTTACTGCCT GAGTTGGAAA AACGCAATTT GGCCTATCTG
CATGAAGGGA TGTTTGATGA CAGCGTGACC TTTGATTTCT TAGGTGGTCG AGTGTCGACT
TACTTGCGTC ATCACTACTC AAAAACGCTG ATGGGTGTCG GTGGTTTTAG CGCAGAAACG
GGTGCTACTG CGATTGAAAA TAATGAGTTT GATCTGCTCG CGATTGGTCG TCCATTTATC
GCTAACCCAG ATTACATCGC CCGTGTTCAA AAGGGTGAAG AGCTAAAAGC GTACCAAGAT
TCGATGTTAA CGGAGCTTTA CTAA
 
Protein sequence
MTDILFQPYA LNDVITLNNR IAMAPLTRCM ADDDLVPTDA MVAYYARRAD AGLIISEATI 
IRPDAQGYPN TPGLFTQAQI TGWKKVTDAV HANGGKIFAQ LWHTGRVAHP AFFAGEYVLA
PSALGVEGSV PRRRELQYTV PKAASQAEIK QLVADYAQAA ENARLAGFDG VEIHGANGYL
IDQFLHFDSN QRSDEYGETP ANMARFALEV VDAVIARIGA ERTALRMSPG AYFNIKADPR
DREVFDYLLP ELEKRNLAYL HEGMFDDSVT FDFLGGRVST YLRHHYSKTL MGVGGFSAET
GATAIENNEF DLLAIGRPFI ANPDYIARVQ KGEELKAYQD SMLTELY