Gene VC0395_0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0232 
Symbol 
ID5134996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp266654 
End bp267112 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content47% 
IMG OID640530555 
ProductMarR family transcriptional regulator 
Protein accessionYP_001215073 
Protein GI147672522 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTCTC CACAAGTGAG CTGCCAAACG CCGACTCATG ATCCATTACT TCTGGAAAAT 
CAGGTCTGTT TTCCACTCTA CAGTGCATCG AATGCGGTGA TCCGTGCTTA TCGTCCGCTG
CTTGAACAAC TGGATATCAC TTATTCGCAA TATCTGGTGC TGCTGGTGCT GTGGCAGCAA
AACGGGATAA ATGTGAAAGA TCTCGGTATT AAGCTGCATT TGGATTCCGG CACGTTGACT
CCACTACTGA AAAGATTGGA AGCGAAAGGA ATTGTGGAAC GGCGACGCAG CAGCAGTGAT
GAACGAGTTC GTGAGCTATT TTTGACGCCA GCGGGTTTTG CGTTGCAAGA ACAGGCTCGT
TCAGTACCGA ATGAAATGCT GTGTAAATTT GATCTCAGCT TAGAGGAGCT GATTAGCCTA
AAAACGCTGT GCGAGAAAAT TCTCCATACT CTCGACTGA
 
Protein sequence
MPSPQVSCQT PTHDPLLLEN QVCFPLYSAS NAVIRAYRPL LEQLDITYSQ YLVLLVLWQQ 
NGINVKDLGI KLHLDSGTLT PLLKRLEAKG IVERRRSSSD ERVRELFLTP AGFALQEQAR
SVPNEMLCKF DLSLEELISL KTLCEKILHT LD