| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0231 |
|---|
| Symbol | |
|---|
| ID | 5133964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009456 |
|---|
| Strand | - |
|---|
| Start bp | 266120 |
|---|
| End bp | 266557 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640530554 |
|---|
| Product | putative organic hydroperoxide resistance protein |
|---|
| Protein accession | YP_001215072 |
|---|
| Protein GI | 147671974 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1764] Predicted redox protein, regulator of disulfide bond formation |
|---|
| TIGRFAM ID | [TIGR03561] peroxiredoxin, Ohr subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGGAATA AAAACATGAG TACGATTTAT CAAACTTCCG CGACCGCTTC TGCAGGACGC
AATGGAGTAG TCAGCACCGA AGACAAACTG CTTGAGCTCA ATCTCAGCTA CCCAAAAGAG
ATGGGTGGAA GCGGTACGGC AACCAACCCA GAGCAACTGT TTGCAGTCGG CTATGCTGCT
TGCTTTTCGA ACGCGATTCT GCACGTCGCT CGTGAAGCAA AAGTCGCCTT AAAAGAAGCG
CCTGTGACCG CCACTGTCGG TATCGGACCC AACGGTCAAG GCGGCTTTGC GCTAAGTGTC
GCCCTCGCCG CACACATCGC TTTAGAAGAT GAACAAGCCA GACAGTTGGT GACCGTTGCC
CATCAAGTCT GTCCTTACTC CAATGCGGTG CGTGGCAACA TTGATGTGCA AGTCAGCGTC
AATGGCTTAG CCCTGTAA
|
|---|
| Protein sequence | MRNKNMSTIY QTSATASAGR NGVVSTEDKL LELNLSYPKE MGGSGTATNP EQLFAVGYAA
CFSNAILHVA REAKVALKEA PVTATVGIGP NGQGGFALSV ALAAHIALED EQARQLVTVA
HQVCPYSNAV RGNIDVQVSV NGLAL
|
|---|
| |