Gene VC0395_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0221 
Symbol 
ID5134080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp256901 
End bp257347 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content50% 
IMG OID640530544 
Producthypothetical protein 
Protein accessionYP_001215062 
Protein GI147671560 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATGAATA CTTTATTAAA AACTGCTTTA ACTTCACCAA ATTCATGGGC CCCCCTAGCA 
CTGCGCCTTC CCCTAGCCAT CATTTTTATG GCGCACGGTG CACAAAAGTT GTTTGGTTGG
TTCGGCGGTT ACGGCCTTGA AGGTACAGGT CAATGGATGG CTTCGATTGG CTTAGAGCCT
GGTGTAGCGA TGGCATTTCT GGCCGGAAGT GGGGAGTTTT TTGGCGGATT AGCCATTTTG
CTAGGTCTGC TGACACGTCC TGCCGCACTG GTACTCTCCG TCACCATGCT GGTCGCGATT
TTTAGCGTGC ACTTTAGCCA CGGCTTATTC TTAAGCAACG GCGGTTACGA GTTTGGCTTG
GCTCTGTTGG CAGGCTCTGT TTCACTGCTG ATTTCAGGTG CAGGTCGTCT GAGCCTCGAT
AATCTGCTAC TAAAGCGTCT GGCATAA
 
Protein sequence
MMNTLLKTAL TSPNSWAPLA LRLPLAIIFM AHGAQKLFGW FGGYGLEGTG QWMASIGLEP 
GVAMAFLAGS GEFFGGLAIL LGLLTRPAAL VLSVTMLVAI FSVHFSHGLF LSNGGYEFGL
ALLAGSVSLL ISGAGRLSLD NLLLKRLA