| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0220 |
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| Symbol | |
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| ID | 5134684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 255904 |
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| End bp | 256824 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530543 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001215061 |
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| Protein GI | 147672184 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTAATCT TCACGGGTAA CATCAGAGGA AACTATATGG ACGTAAAAGT CTTTCGCACC
TTTCTTGAAC TGGCCAAAGT TCGCCATTTT GGTCGTGCTG CTGAAAATCT GTATTTGACG
CAAGCGGCGG TGAGTGCGCG CATCAAGCAA CTTGAAAATC ATTTCGATGC TCAGTTGTTT
ACCCGTGACC GTAACAACAT CAAATTGACC TCAGCAGGCG AGCGTTTGGT GGGGTATGCT
GAGGTCATGG TTGCAACGCT GCAGCAGGCG AAATTTGAAT TATCGCTTGA AAGCGGTAAG
GCTTTGCAGC TCACATTAGG CGGTACGCCT AACATTTGGG ATGCTTACTT ACAGCACTGT
TTAAGCCGCA TCACCGATAC ATTTGAAGGC TATGGTTTTT TGGCGGAAGT GATGGGGCGA
GAGCAACTCA ATCGTGGTTT GCTAGAGCGC ACTTTGGATA TGGCTTTCGC TCTGGATCCG
ATCAAAGCCG AAGAATTGCA ATGCAAAAAA GTGGCTGATT TGGTTCTCGT GTTGGTATCC
ACCAAGCCTG ACGATGCCGA TAGCGTGTTT GAAAATCGCT ACGTTTATGT CGATTGGGGC
GCACGTTTTG CTTCAGAGCA TGCCGACCGC CACCCTAAAG CGCCAGCGCC TTTTTTAAGA
ACGTCGACGG CAAGAATTGC GTTAGATTTC ATTTTGGAGA AAGGGGGCAG CGCTTACTTA
CCGCAAACCA TGGTGCAACC CTTATTGGAT GCAGGGCAAT TACATCGTGT GTCCGAGGTG
AATGATTGGC AGCGCCCACT TTATCTGAGC TATCGCAAAA ACAGCTCTTC CATTGAGGCG
ATAGTGCAGG TGGAGAAGTT GATGAAAACG TTAGATCCTT TCAGTGTGGT GCGTACGGTG
GGCAAAGTGG AAGCCGTGTG A
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| Protein sequence | MLIFTGNIRG NYMDVKVFRT FLELAKVRHF GRAAENLYLT QAAVSARIKQ LENHFDAQLF
TRDRNNIKLT SAGERLVGYA EVMVATLQQA KFELSLESGK ALQLTLGGTP NIWDAYLQHC
LSRITDTFEG YGFLAEVMGR EQLNRGLLER TLDMAFALDP IKAEELQCKK VADLVLVLVS
TKPDDADSVF ENRYVYVDWG ARFASEHADR HPKAPAPFLR TSTARIALDF ILEKGGSAYL
PQTMVQPLLD AGQLHRVSEV NDWQRPLYLS YRKNSSSIEA IVQVEKLMKT LDPFSVVRTV
GKVEAV
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