| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0213 |
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| Symbol | lamB |
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| ID | 5134831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 248085 |
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| End bp | 249335 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640530536 |
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| Product | maltoporin |
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| Protein accession | YP_001215054 |
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| Protein GI | 147672344 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4580] Maltoporin (phage lambda and maltose receptor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00663461 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTTAA CGATGAAAAA AGTAAGTGTA ATTGCTGCCG CAGTGGCCGC GACGCTCGCA
GCTGGTTCTG CTTTCGCTGT CGATTTCAAT GGCTACTTCC GCGCTGGTAC TGGAATTAGT
GGTAACGGTA ATGCTGACCA GGCTGTAAAC AAAGCAGGAA CAGGTCGTCT TGGTAACGAA
AACGACAACT ACTATGAGTT TGGGTTTGCT GAAGAACTGA AAACCGGTGA ACAGACGTGG
AAAGTCGAGT CAATGATTGC GCAAGGCAAT AGCGGCGCAA ATGGTTGGGA AGATGGCGAT
TTTAACGTAG CACAGTTCAA CGTTCAGGCT AAAGGCTTAC TTGCTTCTGA CCAAGAAGCA
GTAATGTGGG CGGGTAAACG CTACTACCAA CGTAAAGACA TTCACATTAC TGACTTCTAC
TTCCTAAACA CATCGGGCAC TGGTGGTGGT ATTGAAAACC TTTCTGTGGG TAATCAAAAA
CTCTCTGTTG CTTTGGTTCA AGATGGCGAT AATACGAATT CTTCAGGTTA CATCTTTGAT
GCTCGTCTAG CGAATATTGG TCTATGGGAA AACGCATCTC TTGAACTGGC AATGGCCTAC
AACTTTGCCA CTGAGAAAGA CAGTAAAAAT GAAGTCGCTG ATGATGGTGT TCTAGTTTCG
GCTATTTTAC ATCAAGGCCT GAGCAATGGT TTTAACCAAA CTGTATTCCA ATATGGTACA
GCGGGTTATG GCGCTCAAGC TGCTAATTTT TGGGGTGCTG GTTCTTACTA TGCACGAGGA
ACCGAGGCAT TTAATGATGC GTCAGGTTTC CGTTTATTAA ACTGGGGTGT AATTAACCTA
GGCGAAAATT GGGAAATGGG ACATCAATTA GCTTACTTAG CAGGTAGTGA TATTGGTGGT
CAGTTTGGCG GTGATGGCGC TAATAAAAAT ACTTATACAG GTAAGAGCTT CGATATTGAT
CAATATTCTG TAGTAGTACG TCCAATGTAT AAGTGGAATG ACACCATGCG CACTGTGTTT
GAAGCGGGAT ACAATGCTGG TGAGAAAATT TCTAACGGTG GTTTAGCTAC GGAAGATTTT
GGCAATGCTA AATTCACAGT AGCACAAGCT TGGGCTATGG GAGACAGCTT CTGGGCACGT
CCTGAACTGC GTGTCTACGG TACTTATCTT CTAGATACTG AAAATGACAA AGCGTTTGGC
GATGATGATA CTGAGTTTGT AGTGGGTATC CAAGTTGAAG CTTGGTGGTA A
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| Protein sequence | MELTMKKVSV IAAAVAATLA AGSAFAVDFN GYFRAGTGIS GNGNADQAVN KAGTGRLGNE
NDNYYEFGFA EELKTGEQTW KVESMIAQGN SGANGWEDGD FNVAQFNVQA KGLLASDQEA
VMWAGKRYYQ RKDIHITDFY FLNTSGTGGG IENLSVGNQK LSVALVQDGD NTNSSGYIFD
ARLANIGLWE NASLELAMAY NFATEKDSKN EVADDGVLVS AILHQGLSNG FNQTVFQYGT
AGYGAQAANF WGAGSYYARG TEAFNDASGF RLLNWGVINL GENWEMGHQL AYLAGSDIGG
QFGGDGANKN TYTGKSFDID QYSVVVRPMY KWNDTMRTVF EAGYNAGEKI SNGGLATEDF
GNAKFTVAQA WAMGDSFWAR PELRVYGTYL LDTENDKAFG DDDTEFVVGI QVEAWW
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