Gene VC0395_0205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0205 
SymbolaroG 
ID5134636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp237351 
End bp238517 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content50% 
IMG OID640530528 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_001215046 
Protein GI147671471 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.513022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGATATT TTTCAAGTGC CGATAAGTTA CCCGAAGAAA CGACAGGTGC AGTGATTACC 
AAGGCTGGAG CCGTTGACTG GCAAGGTAAC CAGAAAGTAA AGGAAGAAGT AACGATGTTT
CAAACTGATG ATGTAAAAAT TAAGAAGATT AAAGAGCTAC TGCCACCAGT CGCGGTGTTA
GAGAAATTCC CAGCGACCGA AACGGCGTCG TCCACGACGT TTCAAGCGCG CGAAGCGATT
CATAACATGC TGCAAGATAA AGACGATCGC TTGTTGGTGG TGATTGGTCC ATGCTCTATT
CATGACCCGA AAGCAGCGAT TGAATATGGT CAGCGCCTAA AAGCACTGCG TGATGAGCTC
AGTGGTCAGT TAGAAATCGT GATGCGCGTA TATTTTGAGA AGCCACGTAC CACAGTGGGT
TGGAAAGGTC TGATCAACGA TCCGTATCTC AATGACACTT ATGAGATCAA TGATGGCCTA
CGCATGGGGC GTAAATTGCT GCTGGATCTG ACCGACATGG GGATGCCGAC CGCGAGTGAG
TTTCTCGACA TGATCACGCC GCAGTACGTG GCGGATTTGA TCAGTTGGGG CGCGATCGGA
GCACGCACCA CTGAATCACA AGTGCATCGT GAATTGGCTT CGGGGTTGTC TTGCCCTGTA
GGTTTCAAAA ACGGTACCGA TGGCAACATT AAAATCGCGT CTGATGCGAT TCGCTCTGCT
GGTGCCTCTC ACCACTTCTT GTCTGTTACC AAGTTTGGTC ATTCGGCGAT TGTCGAAACC
GCAGGTAACC CAGATTGCCA CATTATTCTG CGTGGCGGTA AAGAACCCAA CTACAGCGCG
GCGCACGTGA GCAATATCAA GCAAGAGCTG GAAGTGGCTG GCTTACCACA GAAAGTGATG
ATCGATTTCA GTCACGCGAA CAGCTCTAAG CAGTTCAAAC GTCAAATGGT AGTGGCGGAA
GATGTTGCGG CGCAGATTGC GCAAGGCGAG CATGCTATCT TCGGGGTGAT GATTGAATCG
CATCTCGTTG AGGGACGTCA GGATCTGACC CCAGGTTGTA ATCTGACTTA CGGTCAATCC
ATCACGGATG CGTGTATTGG CTGGGAAGAC ACCGAAACAG TACTTCGCCA ACTGGCTGCT
GCGATTGAAG CGCGTCGTCA GCGATAA
 
Protein sequence
MRYFSSADKL PEETTGAVIT KAGAVDWQGN QKVKEEVTMF QTDDVKIKKI KELLPPVAVL 
EKFPATETAS STTFQAREAI HNMLQDKDDR LLVVIGPCSI HDPKAAIEYG QRLKALRDEL
SGQLEIVMRV YFEKPRTTVG WKGLINDPYL NDTYEINDGL RMGRKLLLDL TDMGMPTASE
FLDMITPQYV ADLISWGAIG ARTTESQVHR ELASGLSCPV GFKNGTDGNI KIASDAIRSA
GASHHFLSVT KFGHSAIVET AGNPDCHIIL RGGKEPNYSA AHVSNIKQEL EVAGLPQKVM
IDFSHANSSK QFKRQMVVAE DVAAQIAQGE HAIFGVMIES HLVEGRQDLT PGCNLTYGQS
ITDACIGWED TETVLRQLAA AIEARRQR