| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0204 |
|---|
| Symbol | |
|---|
| ID | 5134513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009456 |
|---|
| Strand | - |
|---|
| Start bp | 236444 |
|---|
| End bp | 237163 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640530527 |
|---|
| Product | amino acid ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_001215045 |
|---|
| Protein GI | 147671833 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.701946 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTGA TAGAGTTTCA CCAAGTCAGC AAATGGTACG GTCAATTTCA AGCGCTCAAA
TCGATTTCTC TTACGGTCAA TAAAGGAGAG ATTGTGGTGA TTTGTGGTCC TTCCGGCTCC
GGAAAATCAA CCCTAATCCG CACCGTAAAT GGCTTAGAAA GTATTGATAG CGGTGAAATT
ATCGTTTTAC CCGAATTGGA TGAACGCACG CGACGCAGCG GTAAGATCGG CATGGTGTTT
CAGCATTTCA ACCTGTTTCC ACATCTAACC GTATTGGAAA ATCTCACCCT CGCGCCCATC
CGCACGCTCA AGCTCTCTGC GCAAGAAGCC AAGGAGCGTG CTTATCATTT TCTGCAACGG
GTGAAGATCA CCGATCAAAC ACATAAGTAC CCGATTCAAC TCTCTGGCGG CCAGCAACAA
CGGGTAGCGA TTGCTCGCTC CCTGTGCATG CAACCGGAGA TTTTGCTGTT TGATGAACCT
ACGTCCGCGC TCGATCCTGA AACCATTAAC GAGGTACTCG AAGTGATGGT CGACCTCGCG
CAAGATGGCA TTACCATGAT GTGCGTGACT CATGAAATGG GCTTTGCGCG TAAAGTCGCG
CACCGCGTGA TGTTCATGGA TGAAGGGGAA ATTCTCGAAG TGGGTTCACC CGAACAGTTG
TTCCAAAACC CAACGCATCC ACGTACCCAA CAATTTCTCA ATCAGATCCT GAGCCATTGA
|
|---|
| Protein sequence | MKVIEFHQVS KWYGQFQALK SISLTVNKGE IVVICGPSGS GKSTLIRTVN GLESIDSGEI
IVLPELDERT RRSGKIGMVF QHFNLFPHLT VLENLTLAPI RTLKLSAQEA KERAYHFLQR
VKITDQTHKY PIQLSGGQQQ RVAIARSLCM QPEILLFDEP TSALDPETIN EVLEVMVDLA
QDGITMMCVT HEMGFARKVA HRVMFMDEGE ILEVGSPEQL FQNPTHPRTQ QFLNQILSH
|
|---|
| |