| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0203 |
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| Symbol | |
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| ID | 5134325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 235647 |
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| End bp | 236444 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640530526 |
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| Product | amino acid ABC transporter, permease protein |
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| Protein accession | YP_001215044 |
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| Protein GI | 147672412 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.286767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAC GCTTTTTCCG CCCTCTGCTG TTTGCCGCCC TGCAAATGAT GTTAGTGTTT
GCCGGATTGG TCTGGCTACT CGATTCCGGC GCAGAGGCGA TGGGCTATAC ATGGCAGTGG
CATCGCGTGC CTGAGTATGT GTTGATTTTT GAAGACGGCG AATGGTGGGC AGGTGATTTA
CTGCACGGCC TGTTGGTCAC ATTGCAGCTC ACTGGGATCA GTTTGATTTT CACTTTGGCT
TTGGGTTTAA CCACCGCTTT GCTGCGTCAG TCACGTTCAC TGGTCGGGCG AGCTTTAGGC
ACCGGATACA TCGCGGTAGT TCGCAACACG CCGCTTTTGG TGCAAATTTA CCTCCTCTAC
TTTGTGTTTG GCCCCGTCAT TGGGCTCGAC CGCTTTGCCA CCGCGGTGCT TGCCCTCGCT
CTGTTTCAAG GAGCGTATAC CGCAGAGGTA TTTCGCGGCG GGTTAAACAG CATTCCGCAA
GGCCAGTATG AAGCGGCACG CTCGCTAGGC TTATCGCGCT TTTTTACCTT TTACGATGTG
ATCCTACCGC AACTTCTGCA ACGTACATTA CCTCCACTGA CCAATGAGAT GGTGTCGCTG
ATTAAAAACT CGTCTATTGT CAGTGTGATG GCGATTTTTG ATCTCACCAC TCAGGGACGA
AATATCGTCT CGGAAACCGC GATGCCGTTT GAGATCTGGT TCAGCGTCGC GGCGATCTAT
CTGTTGTTAA CCCTGACTCT ATCAGCGTTA TCAGCTTGGC TAGAACATAA ACTGGGCGCG
CAGTGGCGCT CACCATAA
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| Protein sequence | MIKRFFRPLL FAALQMMLVF AGLVWLLDSG AEAMGYTWQW HRVPEYVLIF EDGEWWAGDL
LHGLLVTLQL TGISLIFTLA LGLTTALLRQ SRSLVGRALG TGYIAVVRNT PLLVQIYLLY
FVFGPVIGLD RFATAVLALA LFQGAYTAEV FRGGLNSIPQ GQYEAARSLG LSRFFTFYDV
ILPQLLQRTL PPLTNEMVSL IKNSSIVSVM AIFDLTTQGR NIVSETAMPF EIWFSVAAIY
LLLTLTLSAL SAWLEHKLGA QWRSP
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