| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0201 |
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| Symbol | |
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| ID | 5134641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 233878 |
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| End bp | 234774 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640530524 |
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| Product | amino acid ABC transporter, permease protein |
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| Protein accession | YP_001215042 |
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| Protein GI | 147672361 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACT ATGGCGCAAA ATCCTCCTCG GGCTATCGTT TTACTTTGCT GGATGGCGGA
TTACTGCTCG CAATCGCCAG CCTCATCGGC TGGCTCTATT ACCGTTCGGA AGTAGGCATT
CACTATCAGT GGCATTGGCG TGAAGCGTGG ACGCTAATTT TCACGCCGCG TGCCGATGGC
AGCTTGCCCT ACTTCTTACA AGGCTTAGGC GCAACGTTAC GTTTAAGCTT GTGGGGCATG
GTACTGGCTT TAGTGTTAGG GTCACTGATC GGCATCGCGC GCAGCCAAAA GGCGTGGTTT
GTGCGTTTAC CCGCTAACGC ATTTGTACAG CTAGTACGCA ATATTCCACC ACTGGTGTTT
GTGTTTATCT TCTATTTTTT CATCTCCAAT CAACTCATCC CGCTACTGGG TTTGGATGAG
TTACTGCGCT ACCACACAGC GGAAGTTCAC CCGCTGATCA CTTGGCTGTT TGGCCCTGCC
CGCTTGTGGG AAAACTTGTT GTCCGGCGTG TTGTGTATCG GGTTGCTCTC TTCTGCTTAT
ATTGCTGAAA TCGTACGAGC GGGGCTCGCC AACATCCCAC AGGGACAATG GGAGGCCGCG
GATTCGCTTG GCTTGCCAAC GTGGGGCAAA TACCGCTATG TGATTGCCCC ACAAGTGCTG
ACCGCCATTA CCCCAGCGCT GGCTGGGCAG ACAATATCCC TCATCAAAGA CACGTCGATC
ATCTCGCTGA TTTCGATTCA AGAACTGACC TTTGTCGGCA GCGAAATCGC CAACTCATCT
GGACTAATTT TTGAGATTTG GCTGATTGTC GGCGCAGCCT ATCTGGTGCT TTGCCTCACG
CTGTCTATGC TGTTTAAGCA AGTAGAGAAG CGCAGCTTAC GCCATTTAAG CCGTTGA
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| Protein sequence | MNNYGAKSSS GYRFTLLDGG LLLAIASLIG WLYYRSEVGI HYQWHWREAW TLIFTPRADG
SLPYFLQGLG ATLRLSLWGM VLALVLGSLI GIARSQKAWF VRLPANAFVQ LVRNIPPLVF
VFIFYFFISN QLIPLLGLDE LLRYHTAEVH PLITWLFGPA RLWENLLSGV LCIGLLSSAY
IAEIVRAGLA NIPQGQWEAA DSLGLPTWGK YRYVIAPQVL TAITPALAGQ TISLIKDTSI
ISLISIQELT FVGSEIANSS GLIFEIWLIV GAAYLVLCLT LSMLFKQVEK RSLRHLSR
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