| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0183 |
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| Symbol | |
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| ID | 5134352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 215134 |
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| End bp | 216039 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530506 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001215024 |
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| Protein GI | 147672094 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTTA ACCAACTCAA TCTGGCCGAC ATTCGCGCCT TTGTACTGAT TGCCAAACTC
GGCAATTTCA CTAAAGCCGC GGAAGAGCTA GAGGTTTCTC GCTCACATGT TTCACGCCAG
CTGAGCCAGT TGGAAAACAG CATGGGCGTC ACTCTTGTCA TCCGTACCAC ACGCAGCCTT
TCGCTCACGG ATGCTGGGGA ACTCTTCTAT CGTCAATGTG AACAAGCCCT GAGCAGTATT
GAACAAGCCG TGTTAGCCGC TGTAGATGAT GTGCAAGAAG CGCGCGGGGA GCTACGCATC
AACAGTGTGG GCGGGCATAT TGGGGAAGAG TTAATTGCGG ACATTTGCAG TGCCTTTATG
CAAGAAAACC CTGAAGTGCG TATTCACCTC GATTTCAGTA GTCATCGCGT TGATTTGATT
GAAGAAGGCT TTGACGTGGC ATTTCGGATG GGAAAATTAG AAGATGCCAG CTTCGTAGCG
CGTAAACTCA CCGAAATCCG TATGAGCACG CTCGCTAGCC CCACGTACTT TACCCTGTGT
GGTCAACCTC AACATCCCAA ACAGCTCGCC GAGCATCGCT GTTTAACGGG GTCGGTGAAA
CGTTGGAGCT ACCAACATAA AGAGACGAAG CAGGCTCTCG AAGTACCCGT TGATGGAGAT
TTACAGTGTA AAAACGGCCG AGTGTTAGTT CGAGCGGCAT TGGCGCATAA CGGTATCATT
CGCGTTCCGA CGTTCTACTG CCACCAAGAG ATTGCCCGCG GCGAATTGGT CGAAGTGTTT
CAGGATTGGC ATATCCCAAG CGTTGAGTTT TCGCTCATCT ACCATAAAGA CAAATATCAA
CCAGTGCGCT TAAAGCGGTT TATTGAGTTC AGTAAGCGTT ATTTTGAGCA GGGCATCATC
GAATAA
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| Protein sequence | MQLNQLNLAD IRAFVLIAKL GNFTKAAEEL EVSRSHVSRQ LSQLENSMGV TLVIRTTRSL
SLTDAGELFY RQCEQALSSI EQAVLAAVDD VQEARGELRI NSVGGHIGEE LIADICSAFM
QENPEVRIHL DFSSHRVDLI EEGFDVAFRM GKLEDASFVA RKLTEIRMST LASPTYFTLC
GQPQHPKQLA EHRCLTGSVK RWSYQHKETK QALEVPVDGD LQCKNGRVLV RAALAHNGII
RVPTFYCHQE IARGELVEVF QDWHIPSVEF SLIYHKDKYQ PVRLKRFIEF SKRYFEQGII
E
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