Gene VC0395_0181 details

Gene Information

• Locus tag: VC0395_0181
• Symbol: ribB
• ID: 5134946
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009456
• Strand: +
• Start bp: 213702
• End bp: 214358
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640530504
• Product: 3,4-dihydroxy-2-butanone 4-phosphate synthase
• Protein accession: YP_001215022
• Protein GI: 147671705
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
• TIGRFAM ID: [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 61
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCAGT CCTCATTACT TGCCGAATTC GGCGACCCCA TTACTCGTGT AGAAAACGCA 
CTGCAAGCCT TACGTGAAGG GCGTGGTGTA CTGCTGCTCG ATGATGAAGA TCGCGAAAAT 
GAAGGCGATA TTATCTACGC AGTAGAATCT CTTACTACAG TGCAAATGGC ATTGATGATC 
CGTGAATGCA GCGGCATTGT CTGTTTGTGT CTGACTGAAG CGCAAGCCGA TCGTTTAGCC 
CTACCGCTTA TGGTGGTCAA TAACAACAGT GCGAACCAAA CGGCGTTTAC GGTATCGATT 
GAAGCCAAAC ATGGCGTAAC CACAGGAGTT TCCGCGCAAG ATCGCGTCAC CACCATCAAA 
ACCGCCGCGA ACCCACAAGC AAAGCCAGAA GATTTGGCGC GTCCGGGTCA TGTATTCCCG 
CTACGTGCTC GTGCGGGTGG GGTATTGGCG CGTCGTGGCC ATACTGAAGG TACGGTGGAT 
TTGATGCAGA TGGCGGGCTT ACAGCCAGCG GGTGTGTTGT GCGAACTGAC CAACCCAGAT 
GGCAGCATGG CAAAAACGCC AGAAATCATC GCGTTTGGCA AACTGCACAA TATGCCCGTA 
TTGACCATTG AAGATATGGT GCAATACCGC ATTCAGTTTG ATCTAAAACT GGCTTAA 

 

Protein sequence

MNQSSLLAEF GDPITRVENA LQALREGRGV LLLDDEDREN EGDIIYAVES LTTVQMALMI 
RECSGIVCLC LTEAQADRLA LPLMVVNNNS ANQTAFTVSI EAKHGVTTGV SAQDRVTTIK 
TAANPQAKPE DLARPGHVFP LRARAGGVLA RRGHTEGTVD LMQMAGLQPA GVLCELTNPD 
GSMAKTPEII AFGKLHNMPV LTIEDMVQYR IQFDLKLA