| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0180 |
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| Symbol | potE |
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| ID | 5134663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 211935 |
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| End bp | 213254 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640530503 |
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| Product | putrescine transporter |
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| Protein accession | YP_001215021 |
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| Protein GI | 147672015 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAT CCAATAACAA AATTGGTGTA GTGCAACTCA CCATCCTGAC TATCGTTAAC
ATGATGGGAT CGGGCATCAT TATGCTCCCG ACTCAGCTTG CCCAAGTCGG CACCATTTCT
ATCTTATCTT GGTTAGTCAC TGCCGCAGGT TCAACTGCCT TGGCGTTTGC CTTTGCAAAA
TGCGGTATGT TCAGTAAAAA ATCCGGCGGT ATGGGTGGTT ACGCCGAATA CGCGTTTGGC
CGCAGCGGCA ACTTTATGGC CAACTATACT TATGCGGTTT CCTTGTTAAT TGCCAACGTG
GCGATTGCCA TTTCCGCTGT CGGTTATGCC GATGTGCTGT TTGGTTTTCA TCTCACTCCG
ATTGAAACCT GTATCGCGAC TATTTTGGTA TTGTGGGTAG CCACTGTGGC TAACTTTGGT
GGCGCACGTA TTACCGGCCA AGTCTCGAGT GTTACCGTTT GGGGCATCAT CATTCCGGTG
ATTGGGGTAT CCATCATCGG TTGGTACTGG TTTGATTTTG ACTTATATCG TTCTGCATGG
AACCCACATG GCTTGCCATT TTTCCAAGCG TTGGGCGGCT CAATTGCAAT GACGTTGTGG
GCATTCTTGG GTTTAGAATC GGCGTGTGCT AACGCCGATG CGGTGGAAAA CCCAGAGAAA
AACGTACCGA TTGCGGTCAT GGGCGGCACC TTGGGGGCTG CGGTAATTTA CATCATCTCG
ACCAACGTGA TTGCCGGGAT TGTACCAAAC GCCGATCTGG CTAACTCGAA CGCACCCTTT
GGTCTGGCTT TTGCGCAGAT GTTTAACCCA ACCATGGGCG CGATTGTCAT GGCGTGTGCG
ATTGTGTCTT GTACCGGTTC ACTGCTTGGC TGGCAATTTA CCATTGCGCA AGTGTTTAAA
GCCTCGGCCG ATGAAGGTTT CTTCCCGAAA TTGTTCTCTA AAGTGACCAA AGCCGATGCC
CCTGTGCTGG GTATGCTGAC CATTGTCTCG ATTCAAACGG TGTTGAGTTT GATGACCATC
AGTCCCTCAC TCAATAAGCA GTTTGAGGCG TTAGTGAATT TGGCGGTCGT GACCAACATC
ATTCCGTACA TCCTCTCTAT GGCTGCGCTG GGCGTGATGC AAAAGCAGCT CAATGTACCG
GTGAGCCAAG CGAAAGTGGC CAACGTGATG GCCTTTATTG GTGCCATGTA CAGCTTCTAC
GCGCTGTACA GTTCCGGTGA AACCGCGGTT ATGCTTGGCT CGATTGCCAC CTTCTTCGGT
TGGGTGCTGT ACGGGGCGAT CTCTCGCTCA CAGCTCAATA CACCCATGAA ACACGCCTGA
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| Protein sequence | MSKSNNKIGV VQLTILTIVN MMGSGIIMLP TQLAQVGTIS ILSWLVTAAG STALAFAFAK
CGMFSKKSGG MGGYAEYAFG RSGNFMANYT YAVSLLIANV AIAISAVGYA DVLFGFHLTP
IETCIATILV LWVATVANFG GARITGQVSS VTVWGIIIPV IGVSIIGWYW FDFDLYRSAW
NPHGLPFFQA LGGSIAMTLW AFLGLESACA NADAVENPEK NVPIAVMGGT LGAAVIYIIS
TNVIAGIVPN ADLANSNAPF GLAFAQMFNP TMGAIVMACA IVSCTGSLLG WQFTIAQVFK
ASADEGFFPK LFSKVTKADA PVLGMLTIVS IQTVLSLMTI SPSLNKQFEA LVNLAVVTNI
IPYILSMAAL GVMQKQLNVP VSQAKVANVM AFIGAMYSFY ALYSSGETAV MLGSIATFFG
WVLYGAISRS QLNTPMKHA
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