| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0153 |
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| Symbol | |
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| ID | 5135035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 178587 |
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| End bp | 179288 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640530476 |
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| Product | chemoreceptor glutamine deamidase CheD |
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| Protein accession | YP_001214994 |
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| Protein GI | 147671711 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 63 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGGTCG TTGCAGTTCG CTTTTCCATC ATCTGGGACA TACTGTTTAT GTCAGACAGT
AAACTTGCCA CTAAGCGCAA ACTAAAACAG GAAGAAGCGA AAGGCCAATA TTATCGCTTC
AACCACCCTA GTGATCATCG GCATTGGGTC AAAGTGATGC CGGGAGGCGT CTATGCTACG
TCCGATCAAG AAATTATTCA TACTGGATTG GGTTCTTGTG TGTCTGCTTG TGCTTGGGAT
ATTGAGATGA AAGTGGGAGG TATGAACCAC TTTTTGCTGC CTTTTAATAA CCAATTTGAA
AGCCAACATT GGCATCCACA AGCGTTATTG TCGGACTCTT CTCGCTACGG ATGTTATGCA
ATGGAGGTCT TGATTAATCG GTTATTGTCC ATGGGGGCAG AGCGAGAGAG ATTGAAGTTT
AAACTGTTTG GTGGCGCTCA CTTAATGGGG TACCAGTCGC TGGTTGGGGA AAAAAACGTC
GAGTTTGTGC TTGAGTATGC CAAACGTGAA AAGCTAAACG TCGTGGCGCA AGATTTGGGA
GGCGCTCAAC CGCGAAAATT GTTGTTTGAT CCACAGGCCG GGCAGGCATG GGTAAAACGC
ATTGGATTTA GTTCGGCGCA TGCAATTAAA CAGGATGAAG AACTCTATCA ACACAGCATA
GATAAGCAAA TTCCCTCTGA CGATGTGGAG TTGTTTCAAT GA
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| Protein sequence | MLVVAVRFSI IWDILFMSDS KLATKRKLKQ EEAKGQYYRF NHPSDHRHWV KVMPGGVYAT
SDQEIIHTGL GSCVSACAWD IEMKVGGMNH FLLPFNNQFE SQHWHPQALL SDSSRYGCYA
MEVLINRLLS MGAERERLKF KLFGGAHLMG YQSLVGEKNV EFVLEYAKRE KLNVVAQDLG
GAQPRKLLFD PQAGQAWVKR IGFSSAHAIK QDEELYQHSI DKQIPSDDVE LFQ
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