| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0142 |
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| Symbol | |
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| ID | 5134681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 166989 |
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| End bp | 168449 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640530465 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_001214983 |
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| Protein GI | 147672081 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGTACTC GCCCAACCCA TCTTAGTGGT ATTTATTTTA GTGTTAAGTT TTCAAATGCT
GGCCAAAGGA AAAATATCGT GACCGCGCTC CTCTCTGTAC AACAACTCGC GATTTCTACT
GCGCAAGAAA CCTTAGTTGA AAGCTTGTCC TTTGAACTGC ATGCTCACCA AGCGCTGACG
ATATTAGGTG AAACGGGATC AGGCAAAAGC TTGTTGGCGA ACGCGATTAT TGGCAATTTG
CCCGCTGGGC TGCGTAGCCA AGGTAAGATT GCGTTATTTG GCCAATATCA ACATCAGCGA
ACTCAAGCAG AACGTGAAGC GCTATGGGGA AAACAACTTG CCGTCTTGCC CCAAGAGCCT
TGGCATGCAC TCAACCCAAT CATGCGCGCG GGCGAACAAG TGGCGGAGGT GCATCGCTTG
GTGATGGGCA ATCACGCCGC TAGCGCAGCA TTAACCGACT CCGCTTTTCA GCAAGTGGCA
CTTCATCAGG ATCTGAGCAA GTACCCACAT CAGCTCTCTG GCGGCATGGC GCAACGCGTC
GCCTATTTGT GTGCCACCCA AACGCAGGCA CCTTTGCTTA TCGCCGATGA ACCAACCAAA
GGTTTAGATG CCAGCCGCCG CGATCAAATC ATTGCCTTAT TGCAAGCACA ATTAACTCGT
GGTGCGTTGT TAACCATCAC TCACGATATC GAAGTTGCCG AAAAGCTCGG TGGAACCATC
ATTGTGATGC GCAAAGGTGT TATTCAAGAG CAAGGGCCAG CCCAACAAGT GCTGAGTCAT
CCTCAATCAG ATTACACCAA GGCGCTGATT AACGCTGACC CCAGATATTG GCCAACCACA
CCGCAGAGTA AAACAGGAGA GCCCCTGTTG ACCGTGGACA ATATCGCCAT GCATCGCGGG
GAGAAGTGCT TGTTTGATTC GCTGAGTTTC ACCCTCAGCG CCGGAGAAAT TCTTGGCATC
AGTGGTGATA GCGGCTGCGG GAAATCTACT CTTGCCGATC TATTACTCGG GTTACTTAAA
CCCAGCCAAG GCCGTATTCA TCGCCTACAA GCGATCCCTC TCGGTAAGGC ACTGAAACTC
TATCAAGATC CGCCTAGCGC CTTGGCGAAA AGCGTCACTT TACAGACACT ATTGGAAGAT
GTGTGTCGTC AGCATTCGGT CGAACGCAGC CAAATTCCTC GTTTACTGGA ACGCCTCGCT
TTGTCACCCA ACTTACTGTC ACGCAAAGCC AATCAAGTTT CAGGCGGAGA ATTACAACGT
TTTGCGATTC TGCGCGCTTT ACTGACGCGG CCAACACTCT TAGTCGCCGA TGAGCCCACC
TCGAGACTTG ACCCCATCAC GGCAGCCAGT ACCTTGCAGT TAATCATCGA GTTAACTCAA
GAGATCGGCT GCGCTTTGGT CTTGATCAGT CACGACAAGC TCGCCCTTGA GAAAACCTGC
CATCGTGTAC TCTCTTTGTA A
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| Protein sequence | MGTRPTHLSG IYFSVKFSNA GQRKNIVTAL LSVQQLAIST AQETLVESLS FELHAHQALT
ILGETGSGKS LLANAIIGNL PAGLRSQGKI ALFGQYQHQR TQAEREALWG KQLAVLPQEP
WHALNPIMRA GEQVAEVHRL VMGNHAASAA LTDSAFQQVA LHQDLSKYPH QLSGGMAQRV
AYLCATQTQA PLLIADEPTK GLDASRRDQI IALLQAQLTR GALLTITHDI EVAEKLGGTI
IVMRKGVIQE QGPAQQVLSH PQSDYTKALI NADPRYWPTT PQSKTGEPLL TVDNIAMHRG
EKCLFDSLSF TLSAGEILGI SGDSGCGKST LADLLLGLLK PSQGRIHRLQ AIPLGKALKL
YQDPPSALAK SVTLQTLLED VCRQHSVERS QIPRLLERLA LSPNLLSRKA NQVSGGELQR
FAILRALLTR PTLLVADEPT SRLDPITAAS TLQLIIELTQ EIGCALVLIS HDKLALEKTC
HRVLSL
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