| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0139 |
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| Symbol | |
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| ID | 5134851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 162870 |
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| End bp | 163526 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640530462 |
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| Product | DNA-binding response regulator |
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| Protein accession | YP_001214980 |
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| Protein GI | 147672339 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.315235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTTTAC TATTAGTTGA AGATGACACG TTGCTCGGTG AATCAATGCA AGTAGCGTTA
AGCCGACAAG GCTATACGGT TGACTGGCTG GAGCGGGGTG GTGGCGTCGT GACCGCCCTG
AAAACCGAGC AATTTACGGC ACTGATTTTG GACCTCACCT TGCCAGATAT GGATGGCTTG
GAAGTCCTGC GCCAAATTCG GCGAGCGGGT TATACATTGC CTGTCATGAT ACTCACGGCA
CGGGATGATA TCAGTGATCG GGTCAAAGGG TTGGATGGCG GTGCAGATGA GTACATAGGT
AAGCCGTTTG CGCTCGAAGA GCTGCTCGCA CGTTTACGCT TGATCATTCG TCGTAGCTCA
GGGAGCGCAG AGGAGCTCAT CTCCGTTGGG GAACTTGACC TTTCGCTCTC TAAACAAGAA
ATCTACTACG CTCAGCAAGC TCTGAAATTA ACGCGAAATG AGTACAAAAT CCTCGCCAGT
TTGATGACCC AAGCGGGAAG AGTGATGAGT AAAGAGCTTT TGCAGCAAGC ACTGCACGGC
TGGGATGAAG GCAGCAGTGA TAACGCAATC GAAGTACATA TTCATAATCT GCGCAAAAAA
TTGCCGGATA ATCTGGTTAA AAATGTACGA GGTGTGGGGT ACATGATTGA AAAATAA
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| Protein sequence | MRLLLVEDDT LLGESMQVAL SRQGYTVDWL ERGGGVVTAL KTEQFTALIL DLTLPDMDGL
EVLRQIRRAG YTLPVMILTA RDDISDRVKG LDGGADEYIG KPFALEELLA RLRLIIRRSS
GSAEELISVG ELDLSLSKQE IYYAQQALKL TRNEYKILAS LMTQAGRVMS KELLQQALHG
WDEGSSDNAI EVHIHNLRKK LPDNLVKNVR GVGYMIEK
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