Gene VC0395_0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0136 
Symbol 
ID5134841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand+ 
Start bp160688 
End bp161398 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content49% 
IMG OID640530459 
Producthypothetical protein 
Protein accessionYP_001214977 
Protein GI147671539 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.278669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGGCTCA CGATGAGGAG AACTCTCATG ACAGGATTTT TTCAACGTTT ACAAAAAGAG 
ACGCAAGCGG CTCAGCAACA GATGTTACAA GCTCCAGTAT TTGCAGCTTG TGCTCGCGGC 
GAGATCACGC TTGACATGTA CTTAAGCTTT TTGACCCAAG CCTACCATCA CGTCAAACAT 
ACCGTACCAC TGTTAATGGC GTGTGGGGGA CGATTGAGTG ATCGTTATGA GTGGGTGCGC 
ATTGCCATTG CCGACTATAT CGATGAGGAG AAAGGTCACC AAGAATGGAT CCTCAATGAT 
ATTCGAGTTT GTGGTGGTGA TGCTCAAGCG GTGCGAAATA ACCAAGGGGT GGGGCAAGTC 
AGTACACCGA TTGAATTGAT GGTCGCTTAT CTTTACCACC AGATTGATCG CGCCAATCCG 
CTCGCGTTGT TTGGTATGGT CTGGGTGCTC GAAGGGACGA GTGTGGGCGT GGGCGGCAAC 
ATAGCGCGCT TGGTCAAACA GCAGCTCAAT TTACCTGCTA AAGCCATGAG CTATCTCACC 
TCACACAGTG AACTGGATCA AGACCACATT CGCTTCTTCG AATCCTTAAT GGACAAAATT 
ACCGCGGAAG AGGATCAGCA AGCGATTATC CACTCGGCGA ATCAGGTGTT TTATCTGTAT 
GGGCAGATGT TGCGTGAATT ACTGCCCCAG ACCCAGCAAC AGGCAGCTTA G
 
Protein sequence
MRLTMRRTLM TGFFQRLQKE TQAAQQQMLQ APVFAACARG EITLDMYLSF LTQAYHHVKH 
TVPLLMACGG RLSDRYEWVR IAIADYIDEE KGHQEWILND IRVCGGDAQA VRNNQGVGQV 
STPIELMVAY LYHQIDRANP LALFGMVWVL EGTSVGVGGN IARLVKQQLN LPAKAMSYLT 
SHSELDQDHI RFFESLMDKI TAEEDQQAII HSANQVFYLY GQMLRELLPQ TQQQAA