Gene VC0395_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0114 
Symbol 
ID5135002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp129322 
End bp130209 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content47% 
IMG OID640530437 
Producthypothetical protein 
Protein accessionYP_001214955 
Protein GI147671755 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTCAA CAAATTCCTT TGTCGTGCAT AACTGGGTGA GCTTGGTTCC AGAGATGGAA 
ATGGATACAC AAGAAAGGCT TTACCTTTTG GTTGATGGTG CTCAAATCAG CCATCTAGCA
CAAGCCTTGT ATCGTCTATC GGGTGAATTG GTTTTGGAGC CTTTGTACCT TTTTCCGCCT
TTTGAGCAGC TTAAAGAGGT GTCTCCTTAT CTCGTGTTAG CAACGGATAC GGTTAAAACC
TGGTTCCTTG AGCAGAATCA GGGGTTAGCT GGGTTCTTTT TTGCTTCTTT AGATTCTATT
GAAGAGATTG CTGAACAACT GCGTCGTTTG ATCCAAGTGG AGTCCCCTTA TGGTTCAACG
GTGTTTCTTA AAATGGCGAA CAGTGAATGC GCGTATGTAC TTTTGAGTAC CCAATGCCAA
CCGCTGTGGA AAGTGATCAA TCGAGCTTGG TTGCCGACAC GTCAAGGTTG GCAATATGTG
CAACGACCCG AACTGACGGC GACTCAAGAC ACTCCTGTGC GATTCAAGTT AACCGATGAG
CAGTGGCAAC GGCTTGGCAA CATCACATGG CTTAATACCT TAGAAACGGT CGAGCGGCAT
GTGCAGCAGT GGTTCCCGGA TTTAGCGCAG CAGTGGCAGT CTGACCCTGA ACTATTTCAT
CGTCATGCTC AATGGGCTTA CCAGCAGGGC TTTAGCAGTG AGCGAGATTT AATGCTGTTT
TTTAATGTGT TGGGGTTTTT AGGTGTTGAT GCTCTTGAAA AAGGGAAGTA TCCCGAGATT
GATCCTTTGT TGCATCAGGC TTCAAGTCGT ACGCCTTCGC AACGCATTGA AGCTGCCGCA
GAGCTGGCTT ATCAACATTC ACAATCATCA CAGGAGGTAC AAGGATGA
 
Protein sequence
MRSTNSFVVH NWVSLVPEME MDTQERLYLL VDGAQISHLA QALYRLSGEL VLEPLYLFPP 
FEQLKEVSPY LVLATDTVKT WFLEQNQGLA GFFFASLDSI EEIAEQLRRL IQVESPYGST
VFLKMANSEC AYVLLSTQCQ PLWKVINRAW LPTRQGWQYV QRPELTATQD TPVRFKLTDE
QWQRLGNITW LNTLETVERH VQQWFPDLAQ QWQSDPELFH RHAQWAYQQG FSSERDLMLF
FNVLGFLGVD ALEKGKYPEI DPLLHQASSR TPSQRIEAAA ELAYQHSQSS QEVQG