Gene VC0395_0107 details

Gene Information

• Locus tag: VC0395_0107
• ID: 5134313
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009456
• Strand: +
• Start bp: 120117
• End bp: 120752
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640530430
• Product: hypothetical protein
• Protein accession: YP_001214948
• Protein GI: 147671609
• COG category: [S] Function unknown
• COG ID: [COG3110] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 52
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACCTA TGCAGCGTCT TACTTGTTTG CTTGCCCTCT GTTTTGCTGC TTCAGCAAGT 
GCCAAAGTCA CTATGGAGAT CCCAGATACG ATTGATCTAT TGGTCGTAAA TGGCAGTAGC 
CCTAAACTCT CAGGCGGCTT TTTTGACGCC ACGAAAAAGC TAGAATTAGA GGATGGTGAA 
CAGCAAATTG TCTTTCGTTA CTCGCCTTAT TTCAGTCAAG GCAATGATCG CATCATCATC 
GATAGCGAAG TGGTGATTGC GACTTTTGAC GCTGCCAACC AAGAACTCCG TTTTGATATG 
CCTAAGTATC GAGATGCTCC TCAGGCGACC AAAGCCATCA AAACCATGCA GTGGCAACTA 
CTTGATCAAC AAGGTAAAGC TGTGGAATTA CGCCAAGATC GCCTTATCAA AGAAGGCATG 
CAGATTGGGC GTAACTTTGA GTTTGAAACC GCTGAATATA ATAAGAAAGG GGGTGTGGCG 
GCCTTAACCA GTTCAATGGC GGTTCAGCCT ATCGCCCAGC AAGAGATTTC CAATGCGACG 
GCCATGGCTG CAGCCGAAGA AATGCTGCAC TTTTGGTATA ACAAAGCGGA TGCTGAGACC 
AAAGCTCGCT TTAAAGCCTT TGTTAATCAA CAATAA 

 

Protein sequence

MKPMQRLTCL LALCFAASAS AKVTMEIPDT IDLLVVNGSS PKLSGGFFDA TKKLELEDGE 
QQIVFRYSPY FSQGNDRIII DSEVVIATFD AANQELRFDM PKYRDAPQAT KAIKTMQWQL 
LDQQGKAVEL RQDRLIKEGM QIGRNFEFET AEYNKKGGVA ALTSSMAVQP IAQQEISNAT 
AMAAAEEMLH FWYNKADAET KARFKAFVNQ Q