Gene VC0395_0101 details

Gene Information

• Locus tag: VC0395_0101
• ID: 5134958
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009456
• Strand: -
• Start bp: 110558
• End bp: 112432
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640530424
• Product: hypothetical protein
• Protein accession: YP_001214942
• Protein GI: 147672238
• COG category: [R] General function prediction only
• COG ID: [COG3211] Predicted phosphatase
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.517413
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGGAAGC GTGATGAGCA AGAATCCCAG TTTAGTGAAA TGATTGAAGC GCAACTGTCT 
AGACGCCATT TTTTGGCGGG CAGTGCGGCA GTGAGTGCCG GCGCGTTTTT AGCCTTAAAT 
CCGGTTGCGA GTGCGGTGGC TGCGCCTGCC ACATCAAACC TACTGAATTT CTCAGCAATC 
CCTGTGTCAA CAGAAGATAA AGTGATTGTG CCTAAAGGCT ATAAAGCCAC TCCACTCATG 
TCTTGGGGCG ATCCTATTTT TGCGAATGCG CCAGAATTTG ACCAAAGCGG CAAGCAAGAC 
TCAAAAGCAC AAGAGAAGCA GTTTGGCGAT AATACGGATG GCATGAGCTT TTTCCCGATC 
AGCGAAGATC GCGGTGTGCT CGCGATCAAC AATGAATACA CCAATTACGA GTATCTGTTT 
GATCATCAAG GTAAAGCGAT GACGGCGGAT GACGTACGTA AAGCGCAAGC GGCAGTCGGT 
GTCACCATTG TTGAAGTGGT ACGTAAAAAT GGTCAGTGGA TGGTAGACCG TCAAGGTGAA 
CGTAATCGTC GGATCACCGC TTATACACCA ATGATGATGA CCGGTCCTGC TGCAGGCCAT 
GATCTGCTGA AAACGGCTGA AGATCCTAGC GGATTAAAAG TGCTGGGTAC TTTCAATAAC 
TGTGCGAATG GTGAAACTCC TTGGGGCACT TACCTCACTT GTGAAGAAAA CTTCGATGAT 
TTCTTTGGTG CGGACCAAGA AGGCAGTGTC GATGCTGATC AGAAGCGTTA CGGAATTGCT 
GCTGAACCTA GTGATTACCA ATGGCATAAG CACGATGCGC GTTTCGACAT AACCAAGAAC 
CCTAAAGAGC CAAACCGCTT TGGTTGGGTT GTGGAAATTG ATCCACATAA TCCGAACTCT 
ACACCACTGA AACGTACCGC TCTTGGTCGT TTTAAACATG AAAATGCGGC ACTGGTGATT 
AATAATGATG GCCATGTGGT GGTTTATCTT GGTGATGATG AACGCGGCGA ACATCTGTAT 
AAATTCGTTT CCAAGCATCG CTATCAAGCC GGTAATGATC AGCAAAACCG TAATCTGCTG 
GAAGAGGGCA CCTTGTATGT CGCTAAGTTC GATATCAATG AAAACGAACT GAAAGGCAGC 
GGACGCTGGA TGGAGCTGAG CTTTGGCAAG AATGGCCTCA CTCCTGAAAA CGGATTTAAA 
GATCAAGCCG AAGTGCTGAT TTTTGCTCGT CGTGCGGCGA CCCAAGTGGG CGCAACGACC 
ATGGATCGAC CAGAATGGGT GGCCGTGCAT CCTGATAAAA AGCATGTGTT CTGTACGCTC 
ACCAACAACA AAAACCGTGG CAAAGAAGGT CAACCTGTTG GTGGCCCGAA TCCACGCGAG 
AAGAATAACT ACGGGCAGAT CGTTCGTTGG ATGCCAGCAC AGGGTGATCA CACCAGTGAT 
GTGTTCGCTT GGGACCTCTA CTTAATTGCA GGTAATCCAA CCGTTCACAA AGGCACCCTG 
TACGCAGGTA GCGAAAACAT TTCGGCTGAC AATATGTTTA ACAGCCCTGA TGGGATTGGT 
TTTGACACTG CAGGTCGCTT GTGGATCCAA ACCGATGGTA ACTACTCTAA CCAAGGTGAT 
TTTGCTGGGC AGGGGAATAA CCAAATGCTG TGTGGTGACC CAATCACAGG TGAAGTGAAA 
CGCTTCTTAA CAGGTCCTAT TGCGTGTGAG ATCACGGGAT TAACCTTCAG CCCTGATCAC 
AAAACCATGT TTGTTGGTGT TCAGCATCCG GGTGAAGAGG CTGCTCCATC GCATTTCCCT 
TACGGTGGTA CAAGCAAACC TCGTTCAACC ATCATGATGA TCACCCGTGA AGACGGCGGT 
GTCATCGGCG CATAA 

 

Protein sequence

MWKRDEQESQ FSEMIEAQLS RRHFLAGSAA VSAGAFLALN PVASAVAAPA TSNLLNFSAI 
PVSTEDKVIV PKGYKATPLM SWGDPIFANA PEFDQSGKQD SKAQEKQFGD NTDGMSFFPI 
SEDRGVLAIN NEYTNYEYLF DHQGKAMTAD DVRKAQAAVG VTIVEVVRKN GQWMVDRQGE 
RNRRITAYTP MMMTGPAAGH DLLKTAEDPS GLKVLGTFNN CANGETPWGT YLTCEENFDD 
FFGADQEGSV DADQKRYGIA AEPSDYQWHK HDARFDITKN PKEPNRFGWV VEIDPHNPNS 
TPLKRTALGR FKHENAALVI NNDGHVVVYL GDDERGEHLY KFVSKHRYQA GNDQQNRNLL 
EEGTLYVAKF DINENELKGS GRWMELSFGK NGLTPENGFK DQAEVLIFAR RAATQVGATT 
MDRPEWVAVH PDKKHVFCTL TNNKNRGKEG QPVGGPNPRE KNNYGQIVRW MPAQGDHTSD 
VFAWDLYLIA GNPTVHKGTL YAGSENISAD NMFNSPDGIG FDTAGRLWIQ TDGNYSNQGD 
FAGQGNNQML CGDPITGEVK RFLTGPIACE ITGLTFSPDH KTMFVGVQHP GEEAAPSHFP 
YGGTSKPRST IMMITREDGG VIGA