Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0100 |
Symbol | |
ID | 5134441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 109626 |
End bp | 110498 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640530423 |
Product | hypothetical protein |
Protein accession | YP_001214941 |
Protein GI | 147671877 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0254877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCTATAG TTTGGATTAG TCACCAGATA AGGAGAATGA ACATGGTGAA AAACACAATG CTCAACCGTT TAAATGAGCT ACCAAGACTG TCTAAAGTTC TGCAAGAATT GCTGGATATG GCCAATCAGC CTGATGTGGA TTTTCATCAG CTCAGCAAAA AAATCACGCT GGATCAAATC CTGACGGCGC GTTTGCTCCG CATGGCTAAT TCTGCTTATT TTGGTGGTAA CGGACATATC GCTACCGTAA ACGATGCCAT CATCCGAGTC GGCATTGAGT CGGTTCGTAC TCTTGTTGTT GCTTCCGTCC TCTCCAGTAC TTTTCCAAAA ATTGAGACTC TCGATCTGAA TGATTACTGG ACCAATACCT TTGAAACAGC GTTAATTGCC AGCAAGATTG CCGAACAAGT CGGTTTGGAT AAGTCAGAAA CGTTTACCAC AGGCGTGCTG CATAACATTG GCGAACTCAT GATTCATACT TTGATGCCCA CCGAGGCCTC ACTGATCCAA CAGAAAATCG CCCAAGGCAT GGATCCGCTC AGCGCTCAAG AAGAGGTCTT AGGTATTTCA GCGCCTCGCA TTGGTGCGAT GTTGGCAAAA GAGTGGAAAT TCCCTTCGGA AATGGTTGAT GCCATTAAAC ATTTTGATGA ACCCCGTGAA GCCGAAATCT CCCCCAAACT GGCGGTGGCG ATTCACTTTG CCCGCGATAT TAACTTCAGT TGGGACAAGC TCACGGAAAG CAAAGAGAAA TCGATCTACC TTGCTGACCA TCCTGACTCG CGTTTACTCA GCATTTCTGC TGCCTTCCAA TCCACCATTG ATCGGGTACG CGGCAATGGA AAGGAGTTAG CCACACAGAT GATGGCGGCC TAA
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Protein sequence | MPIVWISHQI RRMNMVKNTM LNRLNELPRL SKVLQELLDM ANQPDVDFHQ LSKKITLDQI LTARLLRMAN SAYFGGNGHI ATVNDAIIRV GIESVRTLVV ASVLSSTFPK IETLDLNDYW TNTFETALIA SKIAEQVGLD KSETFTTGVL HNIGELMIHT LMPTEASLIQ QKIAQGMDPL SAQEEVLGIS APRIGAMLAK EWKFPSEMVD AIKHFDEPRE AEISPKLAVA IHFARDINFS WDKLTESKEK SIYLADHPDS RLLSISAAFQ STIDRVRGNG KELATQMMAA
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