Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0094 |
Symbol | |
ID | 5133981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 104482 |
End bp | 105408 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640530417 |
Product | hypothetical protein |
Protein accession | YP_001214935 |
Protein GI | 147671547 |
COG category | [S] Function unknown |
COG ID | [COG2035] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00000305828 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCAGGAA AAACAATGAA CTACTTGAGC ACCTATTTAA AAGGTCTGGC TATGGGCGCC GCTGATGTGG TACCGGGTGT ATCGGGCGGC ACCATCGCCT TTATTACTGG CATTTACGAT ACTCTGCTTG AAAGCATTCG CCGCATCAAT CCTAGCTTAC TCAAGGTATG GAAAGCGCAA GGCTTGGCAG GAGTATTTCG TCACATCAAC GGCCTTTTTT TGATCACGCT ATTCGGTGGC ATTTTTACCA GCATCGCAAC CTTAGCCAAA CTTATCTCTT GGCTATTAGT CACGCATCCT ATTCCTATTT GGTCATTCTT CTTCGGCCTG ATTTTGGTGT CGGTATGGCA TATGCTGCGC CAAATCGAAC AAAAAAAGCT TTCTCGTCTC CTGTGGCTGA TTGCCGGAGC CATTTTCGCC TACGGCATTA CCGTGCTTAA ACCACTACAC CTTGAGCCCA CTTACATCAA TGTGCTGATT TCTGGTGCGA TTGCGATTTG TGCCATGATC CTGCCTGGCA TTTCCGGCAG CTTCATCTTA CTGCTGATCG GTATGTATGC GCCTGTTTTG GGCGCAGTGA AAACCTTCCA ACTGGACATT CTGCTGATTT TCTTAACCGG ATGTGTGATT GGATTGCTCA GTTTTTCGCA TATTCTGTCA TGGCTTTTAC GCCGTTACCG CGATGTGACT CTGACCTTCC TAACCGGATT GATGCTCGGC ACTCTGCCTA AAATTTGGCC ATGGAAAGAA ACGCTCTCTT GGCGGGTCAA TTCCAGCGGA GAGCAAGTAC CACTGCTGCA ACGCAACCTA TCACCGTTTG AATTTGAAAC GCTTACGTCA CAGCCATCTC AGTGGTTGTT AGCGCTGGTG CTCATGCTAG CCGCGGTCGC TTTAGTTCTC GGTTTAGAAA AATACGCCGA AAAGTAG
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Protein sequence | MAGKTMNYLS TYLKGLAMGA ADVVPGVSGG TIAFITGIYD TLLESIRRIN PSLLKVWKAQ GLAGVFRHIN GLFLITLFGG IFTSIATLAK LISWLLVTHP IPIWSFFFGL ILVSVWHMLR QIEQKKLSRL LWLIAGAIFA YGITVLKPLH LEPTYINVLI SGAIAICAMI LPGISGSFIL LLIGMYAPVL GAVKTFQLDI LLIFLTGCVI GLLSFSHILS WLLRRYRDVT LTFLTGLMLG TLPKIWPWKE TLSWRVNSSG EQVPLLQRNL SPFEFETLTS QPSQWLLALV LMLAAVALVL GLEKYAEK
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