Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0091 |
Symbol | |
ID | 5134571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 101894 |
End bp | 102652 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640530414 |
Product | hypothetical protein |
Protein accession | YP_001214932 |
Protein GI | 147671554 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0000127543 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCAC GGCCCGCTGA AAAAATTGAT AATAATGATG GCCAAACAGA GACTCCACGC AGTAAAACGG TGTCGACCAT CAACAGCACG GATGCGCTGG CCATGGTTGA ACACAGTAGT GAGCTGACTT TAAGCATTAC GACCCCTGTC GGAACAAAAT TCGTCTGCCG CACTCCGTTT ATTGGTACTC ATACGGATAA GTTTTTACTG GTGGAAATGC CCAAAATATC GGCTGATGAT CTGCAATATT TCTTCCAAGA AGGGTTTTGG ATGAATATTC GCGCGATTTC ACCACGCGGT GAAGGAGCGC TGATCCATTT CCGCAGCCAA CTGATGCACA TCTTACAAGA GCCGGTTCCC ATGGCTTTTC TCTCCATTCC CAATACCATG CAAGTCTCTC AATTACGTAA AGAGCCGAGA TTTGAGCTAA ATTTAGCCGG CAAAGTACTG TTTGATGAGC ATCGTGGGGA TTGTGAACTG CGCGATTTAT CACGCAGTGG TTGCCGTTTC ATCACGCCGC CTTTAGGCAA AACGTACCAA GTCGGGGATT TGGTCGCGTT AGAGATTTTT TCAGACTTGA GGGGCACAAA AACCTTCCCG CCTTTGACCG GAAAAATCTG TAACTTACAG CGCTCACTGC ACCATGCTCG TTATGGTTTA GAGTTCAATG AAGAGGGGCG AAATAACGCC AAAAACTTGC TCGCACAGCT TAAGTTTAAC GGCACCAAAC TGACTCTTAA TGCCGAGAAA AAGGCGTAA
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Protein sequence | MNSRPAEKID NNDGQTETPR SKTVSTINST DALAMVEHSS ELTLSITTPV GTKFVCRTPF IGTHTDKFLL VEMPKISADD LQYFFQEGFW MNIRAISPRG EGALIHFRSQ LMHILQEPVP MAFLSIPNTM QVSQLRKEPR FELNLAGKVL FDEHRGDCEL RDLSRSGCRF ITPPLGKTYQ VGDLVALEIF SDLRGTKTFP PLTGKICNLQ RSLHHARYGL EFNEEGRNNA KNLLAQLKFN GTKLTLNAEK KA
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